Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00362 and BL01719

See DNA alignment / Visit BSNT_00362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00362___ybdM.1.5803.seq
#    -bsequence pep-align/BL01719.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00362___ybdM-BL01719.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00362___ybdM-BL01719.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00362___ybdM
# 2: BL01719
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 275
# Identity:      90/275 (32.7%)
# Similarity:   144/275 (52.4%)
# Gaps:          27/275 ( 9.8%)
# Score: 413.0
# 
#
#=======================================

BSNT_00362___      1 MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILTQTP     50
                       :|.|.:.|||||||.|.:|..:|:|...||||.||:.||..::.....
BL01719            1 --MKTLIRWLFDRPLKKGTVLEGRYRINRVLGMGNYGITYLAEELGRSGF     48

BSNT_00362___     51 YVLKQLRPTKAKKEKEKVRFQQEIKLLNSIHHPQIPGFIDEFIIDGQAYY    100
                     .|:||.|.|||.....:..|.:|.::|..:..|..|...:.....|:.:.
BL01719           49 RVIKQQRKTKAWTSAGRRSFNREAEILRELDLPAAPRLYEVLRAAGERFI     98

BSNT_00362___    101 VMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDI    150
                     ||::|||:..|:|||:..:.|.|...:.::.::|..:..||.|.|.|.|:
BL01719           99 VMEYIEGKTFEDLLFYDGRVFDEQQTISILKEVLHSVSLLHSRGIIHRDL    148

BSNT_00362___    151 RTPNIIINDGRLCLLDFGLAKQLTPEE-----------MEEIKVRKQDDF    189
                     |.||:|:|.|.:.::|||||.:||..|           |..:.|:  .||
BL01719          149 RIPNLIVNRGTIRIIDFGLACRLTERERVDNRHPEKKLMRAVSVK--SDF    196

BSNT_00362___    190 FDLGETLLFLLYSQYKGKKKKNGTWLEELTLTKEVTLLLKRLLGIEEEYQ    239
                     :.||...||||||.:....::...|.|||:::..:..:|:::|.|:..|:
BL01719          197 YALGHFALFLLYSGFTPSDEEEKCWEEELSISSGLKSVLRKMLQIDLPYE    246

BSNT_00362___    240 HTASIREDLNRAIQSVT--------    256
                     ..    ||:...:.|.|        
BL01719          247 RA----EDIIGDLISCTAEKKKLPF    267


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