Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00604 and BL01715

See DNA alignment / Visit BSNT_00604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00604.1.5803.seq
#    -bsequence pep-align/BL01715.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00604-BL01715.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00604-BL01715.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00604
# 2: BL01715
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      51/113 (45.1%)
# Similarity:    71/113 (62.8%)
# Gaps:           7/113 ( 6.2%)
# Score: 247.0
# 
#
#=======================================

BSNT_00604         1 MAVLSKVIISALIIGFVTEISKRHPTYGGIIAALPLVSLLSLFWMQIQ--     48
                     |.::.|:.:||::|..:|||:::.|..||:||||||||||||||:.:|  
BL01715            1 MFLIVKIGVSAILIAIITEIARKSPEMGGMIAALPLVSLLSLFWLSVQGE     50

BSNT_00604        49 -----SQFASGVLTGIPATVCLLAILAFLLKIHVPFWFALCVGILGWAMF     93
                          ||||.|||.|.|||..||.|:...||...|...::..||.||...
BL01715           51 SLKHLSQFAKGVLWGFPATAVLLLIVVLSLKASFPVIISVVFGICGWGGC    100

BSNT_00604        94 LWMQKIFLNILFN    106
                     |.:||..::.:|.
BL01715          101 LMLQKALIHAIFG    113


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.