Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00604 and BL01715

See Amino acid alignment / Visit BSNT_00604 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence dna-align/BSNT_00604.1.5803.seq
#    -bsequence dna-align/BL01715.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00604-BL01715.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00604-BL01715.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00604
# 2: BL01715
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity:     213/374 (57.0%)
# Similarity:   213/374 (57.0%)
# Gaps:          85/374 (22.7%)
# Score: 481.0
# 
#
#=======================================

BSNT_00604         1 ATGGCAGTTTTA--AGTAAAGTAATC---ATCTCTGCGTTGATTATCGGT     45
                     |||   .|||||  ||||||  ||||   .|.|||||    |.|||.|.|
BL01715            1 ATG---TTTTTAATAGTAAA--AATCGGGGTTTCTGC----AATATTGAT     41

BSNT_00604        46 T----TTGTTACTGAAATATCA--AAAAGACATCCGACCT---AT-GGCG     85
                     |    ||.|.||.||.||..||  |||    |||  .|||   || ||||
BL01715           42 TGCCATTATAACCGAGATTGCACGAAA----ATC--GCCTGAAATGGGCG     85

BSNT_00604        86 GCATCATTGCTGCTTTGCC-CTTGGTCAGTTTATTAAGCCTTTTTTGGAT    134
                     |.||.|||||.|||||||| ||| ||||||.|..|.||..|.||||||.|
BL01715           86 GAATGATTGCGGCTTTGCCGCTT-GTCAGTCTGCTGAGTTTATTTTGGCT    134

BSNT_00604       135 GCAAATACA---------------------AAGTCAATTTGCATCTGGTG    163
                     |....||||                     |||.||||||||....||.|
BL01715          135 GAGTGTACAAGGGGAATCTTTAAAGCATTTAAGCCAATTTGCGAAAGGCG    184

BSNT_00604       164 TGCTTACAGGAATCCCAGCTACAGTTTGTTTACTAGCTATTTTG-----G    208
                     ||||....||..|.|||||.||||  .|.|| ||   |.|||||     |
BL01715          185 TGCTATGGGGGTTTCCAGCCACAG--CGGTT-CT---TCTTTTGATCGTG    228

BSNT_00604       209 CTTTTTTGCTGAAAA--TTCATGTGCCGTTTTGGTTTGCATTATGTG---    253
                     .||||..|.|.||||  .|||| |.||     ||||..|||| |.||   
BL01715          229 GTTTTGAGTTTAAAAGCATCAT-TCCC-----GGTTATCATT-TCTGTTG    271

BSNT_00604       254 ---TTGGAATACTAGGATGGGCTATGTTTTTATGGATGCAGAAGATATTT    300
                        ||||||||...|||||||....||.||||..|.||||.|||   ..|
BL01715          272 TATTTGGAATATGCGGATGGGGCGGGTGTTTAATGCTGCAAAAG---GCT    318

BSNT_00604       301 CTCA---ATATATTATTTAACTGA    321
                     ||||   ||..|.||||....|||
BL01715          319 CTCATCCATGCAATATTCGGGTGA    342


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