Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00604 and BL01715
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_00604.1.5803.seq
# -bsequence dna-align/BL01715.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00604-BL01715.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00604-BL01715.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00604
# 2: BL01715
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 213/374 (57.0%)
# Similarity: 213/374 (57.0%)
# Gaps: 85/374 (22.7%)
# Score: 481.0
#
#
#=======================================
BSNT_00604 1 ATGGCAGTTTTA--AGTAAAGTAATC---ATCTCTGCGTTGATTATCGGT 45
||| .||||| |||||| |||| .|.||||| |.|||.|.|
BL01715 1 ATG---TTTTTAATAGTAAA--AATCGGGGTTTCTGC----AATATTGAT 41
BSNT_00604 46 T----TTGTTACTGAAATATCA--AAAAGACATCCGACCT---AT-GGCG 85
| ||.|.||.||.||..|| ||| ||| .||| || ||||
BL01715 42 TGCCATTATAACCGAGATTGCACGAAA----ATC--GCCTGAAATGGGCG 85
BSNT_00604 86 GCATCATTGCTGCTTTGCC-CTTGGTCAGTTTATTAAGCCTTTTTTGGAT 134
|.||.|||||.|||||||| ||| ||||||.|..|.||..|.||||||.|
BL01715 86 GAATGATTGCGGCTTTGCCGCTT-GTCAGTCTGCTGAGTTTATTTTGGCT 134
BSNT_00604 135 GCAAATACA---------------------AAGTCAATTTGCATCTGGTG 163
|....|||| |||.||||||||....||.|
BL01715 135 GAGTGTACAAGGGGAATCTTTAAAGCATTTAAGCCAATTTGCGAAAGGCG 184
BSNT_00604 164 TGCTTACAGGAATCCCAGCTACAGTTTGTTTACTAGCTATTTTG-----G 208
||||....||..|.|||||.|||| .|.|| || |.||||| |
BL01715 185 TGCTATGGGGGTTTCCAGCCACAG--CGGTT-CT---TCTTTTGATCGTG 228
BSNT_00604 209 CTTTTTTGCTGAAAA--TTCATGTGCCGTTTTGGTTTGCATTATGTG--- 253
.||||..|.|.|||| .|||| |.|| ||||..|||| |.||
BL01715 229 GTTTTGAGTTTAAAAGCATCAT-TCCC-----GGTTATCATT-TCTGTTG 271
BSNT_00604 254 ---TTGGAATACTAGGATGGGCTATGTTTTTATGGATGCAGAAGATATTT 300
||||||||...|||||||....||.||||..|.||||.||| ..|
BL01715 272 TATTTGGAATATGCGGATGGGGCGGGTGTTTAATGCTGCAAAAG---GCT 318
BSNT_00604 301 CTCA---ATATATTATTTAACTGA 321
|||| ||..|.||||....|||
BL01715 319 CTCATCCATGCAATATTCGGGTGA 342
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