Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00568 and BL01709

See DNA alignment / Visit BSNT_00568 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00568___ycgM.1.5803.seq
#    -bsequence pep-align/BL01709___ycgM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00568___ycgM-BL01709___ycgM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00568___ycgM-BL01709___ycgM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00568___ycgM
# 2: BL01709___ycgM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     241/305 (79.0%)
# Similarity:   276/305 (90.5%)
# Gaps:           2/305 ( 0.7%)
# Score: 1296.0
# 
#
#=======================================

BSNT_00568___      1 --MITRDFFLFLSKSGFLNKMARNWGSRVAAGKIIGGNDFNSSIPTIRQL     48
                       :||||||||||||..||::||||||.||.||||||.||.:|||.|:.|
BL01709___ycg      1 MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGL     50

BSNT_00568___     49 NSQGLSVTVDHLGEFVNSAEVARERTEECIQTIATIADQELNSHVSLKMT     98
                     |.|||:||||||||||||.|||||||:|||:.|..||.::||||||||||
BL01709___ycg     51 NEQGLTVTVDHLGEFVNSREVARERTQECIRAIQLIAQEQLNSHVSLKMT    100

BSNT_00568___     99 SLGLDIDMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKTLDIFKDFR    148
                     |||||||:|||.:||..||:.||:|::|||||||||||||||||:||:||
BL01709___ycg    101 SLGLDIDLDLVRDNMNSILECAEQHQVMVTIDMEDEVRCQKTLDLFKEFR    150

BSNT_00568___    149 KKYEHVSTVLQAYLYRTEKDIDDLDSLNPFLRLVKGAYKESEKVAFPEKS    198
                     :|||:|||||||||||||:|:::|:|||||.||||||||||.|||||:|.
BL01709___ycg    151 QKYEYVSTVLQAYLYRTEQDLEELNSLNPFFRLVKGAYKESPKVAFPDKK    200

BSNT_00568___    199 DVDENYKKIIRKQLLNGHYTAIATHDDKMIDFTKQLAKEHGIANDKFEFQ    248
                     ||||||||:|:||||:||||||||||||||||.|::|.||.|..|:||||
BL01709___ycg    201 DVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEHQIGKDRFEFQ    250

BSNT_00568___    249 MLYGMRSQTQLSLVKEGYNMRVYLPYGEDWYGYFMRRLAERPSNIAFAFK    298
                     |||||||:|||.|||||||||||||||:||||||||||||||:|||||||
BL01709___ycg    251 MLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFK    300

BSNT_00568___    299 GMTKK    303
                     |||||
BL01709___ycg    301 GMTKK    305


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