Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00567 and BL01708

See DNA alignment / Visit BSNT_00567 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00567___ycgL.1.5803.seq
#    -bsequence pep-align/BL01708___ycgL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00567___ycgL-BL01708___ycgL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00567___ycgL-BL01708___ycgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00567___ycgL
# 2: BL01708___ycgL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     162/286 (56.6%)
# Similarity:   204/286 (71.3%)
# Gaps:          30/286 (10.5%)
# Score: 882.0
# 
#
#=======================================

BSNT_00567___      1 MKSRRISSGGFFLQTAGMRTDWRRIDMKQRIIDELKRIEQSYGVKIVYAV     50
                                               |||||.:|||.||.:|||||:|||
BL01708___ycg      1 --------------------------MKQRIEEELKNIEATYGVKILYAV     24

BSNT_00567___     51 ESGSRAWGFPSQDSDYDVRFIYVPKKEWYFSIEQERDVIEEPIHDLLDIS    100
                     ||||||||.||||||||||||||.:|:||.||:.:|||||.||.|.||||
BL01708___ycg     25 ESGSRAWGLPSQDSDYDVRFIYVHQKDWYLSIDAKRDVIELPIDDSLDIS     74

BSNT_00567___    101 GWELRKTLRLFKKSNPPLLEWLSSDIVYYEAFTTAEQLRKLRTEAFKPEA    150
                     ||||.|.||||:||||||||||||..|||||::.||::|:|::.||.|.:
BL01708___ycg     75 GWELTKALRLFRKSNPPLLEWLSSGTVYYEAYSLAEKMRRLKSRAFSPVS    124

BSNT_00567___    151 SVYHYINMARRNVKDYLQGQEVKIKKYFYVLRPILACQWIEKHGTIPPMD    200
                     .:|||:|||..|.:|||..:|||||||||||||||||||||...|:||::
BL01708___ycg    125 CMYHYLNMASGNFRDYLTREEVKIKKYFYVLRPILACQWIESRRTVPPIE    174

BSNT_00567___    201 FTVLMNELVREPELKAEMETLLERKRRGEELDLEARIDVIHQFIETEIER    250
                     |.||::||..:..||.|:..|||||::|||.:||.:..::|:|||.|:||
BL01708___ycg    175 FQVLLDELTEDGPLKTEIHQLLERKKKGEEFNLEPQNPILHEFIERELER    224

BSNT_00567___    251 IMEAAKELKAEKKDMTSELNRLLLNTVEEVWKDGGS    286
                     :...||..|.:.:|:|.||:||...|::|||.    
BL01708___ycg    225 LQTVAKAYKTDHEDLTQELDRLFRETLDEVWA----    256


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