Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00421 and BL01683

See DNA alignment / Visit BSNT_00421 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00421___ybgA.1.5803.seq
#    -bsequence pep-align/BL01683___ybgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00421___ybgA-BL01683___ybgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00421___ybgA-BL01683___ybgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00421___ybgA
# 2: BL01683___ybgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:      90/243 (37.0%)
# Similarity:   136/243 (56.0%)
# Gaps:           9/243 ( 3.7%)
# Score: 398.5
# 
#
#=======================================

BSNT_00421___      1 ---MTALYSVIKFKIIELIKSGKYQANDQLPTESEFCEQYDVSRTTVRLA     47
                        ...|:|.||..|::.|:||.|.....||||||||:.|||||||:|.|
BL01683___ybg      1 MAKQPQLHSQIKQDIVDKIESGYYPPGSLLPTESEFCKIYDVSRTTLRTA     50

BSNT_00421___     48 LQQLELEGYIKRIQGKGTFVSAAKIQTPIPHKITSFAEQMR--GLRSESK     95
                     |..|.:||.|.|.|||||||:..|::..:......:|||::  |.:.:.|
BL01683___ybg     51 LNHLLMEGAIYRKQGKGTFVAKGKVKQILSSSSLRYAEQLKAQGFKPKIK    100

BSNT_00421___     96 VLELVVIPADHSIAELLKMKENEPVNKLVRVRYAEGEPLQYHTSYIPWKA    145
                     |::|..|.....:...|.:...:.|.::.|:|||:.|.:|:.|:||....
BL01683___ybg    101 VVDLQKIKPSEKLQTRLGIDAEQMVYQVKRIRYADDEEIQFETAYIRTDL    150

BSNT_00421___    146 APGLAQEECTGSLFELLRTKYNIEISRGTESIEPILTDETISGHLLTNVG    195
                     .|.:.:|....||::.:..:.| .|.|..|.|:.:::||.|:.||....|
BL01683___ybg    151 VPEVTEEMANISLYQCISRQGN-NIKRTEEQIKIVISDEEIAHHLNITQG    199

BSNT_00421___    196 APAFLSESLTYDKNEEVVEYAQIITRGDRTKFTVEQSYHS---    235
                     .|.|...:.|:..:||||||:....||||.:|.:|:.|..   
BL01683___ybg    200 TPCFQISTQTFLASEEVVEYSMAYFRGDRVEFFIERDYGQRGK    242


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