Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00363 and BL01663

See DNA alignment / Visit BSNT_00363 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00363___ybdN.1.5803.seq
#    -bsequence pep-align/BL01663.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00363___ybdN-BL01663.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00363___ybdN-BL01663.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00363___ybdN
# 2: BL01663
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:      88/309 (28.5%)
# Similarity:   126/309 (40.8%)
# Gaps:          58/309 (18.8%)
# Score: 269.5
# 
#
#=======================================

BSNT_00363___      1 MVKKWLIPFAVMLSVLFTFTYSASAAGVTAITG-----------NNSFDT     39
                                |...||.|.:|.....:.|.:.           ||||..
BL01663            1 -----------MKKSLFLFVFSLFLMAIPAFSASANVYEDEYEPNNSFAE     39

BSNT_00363___     40 AMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYVRSTYQSAYTGMK     89
                     |..:|.||||.|..|| .:..|:.|:.|.|.|||::.:......|.|...
BL01663           40 AYDVGLWKYKTISATI-HSESDKDYYKFYATKGEQLAIHLKNIPANTDYD     88

BSNT_00363___     90 IEIY-DKNRIP-VSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSR-G    136
                     :.:: |....| |.....:.|.|..     ...|...|.....|.:|: |
BL01663           89 LYLFKDAYGYPAVGSSERMGNQNEI-----IRLDVPETGRYIAVVMSKDG    133

BSNT_00363___    137 TYTGNMYFTLSIEDRIKSGSGTFQFSGAAENKGNTSLSPS-------GSD    179
                     :|.|..::.|...||:|||:.|            .:||||       |..
BL01663          134 SYDGWGFYRLEFIDRMKSGAYT------------ANLSPSSISSPGQGVV    171

BSNT_00363___    180 SSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWRR    229
                     |.|..|:|.|.|.||..|.|..|....|..||.|:|...::..|...|  
BL01663          172 SPVAAVNLANASAIPEGATVKSVSAEGTIYPSLGHTYREVLNKEEGVW--    219

BSNT_00363___    230 ALVNSSTSGSY---DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKID    276
                        ::|.||..   |:.....|.|...|:.:|.:||.:.||..:.:.||:
BL01663          220 ---HTSVSGGTLFPDLKPELALPVKTTWNVRYYSLAWSSSTWRSPQLKIN    266

BSNT_00363___    277 YEYDVTKQF    285
                     |:||.|..:
BL01663          267 YQYDSTYGW    275


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