Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00363 and BL01663
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00363___ybdN.1.5803.seq
# -bsequence dna-align/BL01663.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00363___ybdN-BL01663.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00363___ybdN-BL01663.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00363___ybdN
# 2: BL01663
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1030
# Identity: 491/1030 (47.7%)
# Similarity: 491/1030 (47.7%)
# Gaps: 374/1030 (36.3%)
# Score: 830.5
#
#
#=======================================
BSNT_00363___ 1 ATGGTGAAAAAATGGCTTATTCCATTCGCTGTTATGCTGTCTGTCTT--- 47
.||||||||.|..|..|||..|||| |||| |.||.|||.||
BL01663 1 ---ATGAAAAAAAGTTTGTTTCTGTTCG-TGTT---CAGTTTGTTTTTGA 43
BSNT_00363___ 48 -----ATTC--ACCTTTACGTATTCGGC--ATCAGCTGCCG-----GAGT 83
|||| .|.|||.||..|||||| || |.|..|| ||||
BL01663 44 TGGCGATTCCAGCATTTTCGGCTTCGGCGAAT--GTTTACGAAGATGAGT 91
BSNT_00363___ 84 CACTGCTATCACAGGA----AACAATTCATT---TGA----TACCGCAAT 122
|.|| ||||||||.|| ||| || |.||
BL01663 92 ------------ATGAACCCAACAATTCTTTCGCTGAGGCTTA---CGAT 126
BSNT_00363___ 123 GCCGATCGGTTATTGGAAATATAAAAATAT--------CGAT--ACAACA 162
| |.||.|..||||||||.||.|..|| |||| |||.|
BL01663 127 G----TAGGGTTGTGGAAATACAAGACGATTTCGGCGACGATTCACAGC- 171
BSNT_00363___ 163 ATACTGGAAGCTGGTCAAGATGAAGCCTATTTC-ACTTTTACAGCTAATA 211
|.|||| |||.|||..||||.| |.|||||| ||.|..|
BL01663 172 -----GAAAGC-------GATAAAGATTATTACAAATTTTAC-GCGACAA 208
BSNT_00363___ 212 AGGGAGAAAAAGT----AT--ACGTGAGGAGTACATACCAGAGCGCGTAT 255
||||||||.|..| || ||.|.| ||.||||.|| .||..||
BL01663 209 AGGGAGAACAGCTTGCCATTCACCTAA--AGAACATCCC----GGCAAAT 252
BSNT_00363___ 256 ACAGGGATGAAAATTGAAATTTATGATAAGAATAGAATAC--CTGTTTCT 303
||| |||.|..||..|.||||||...|||| .|..||| ||.|..|.
BL01663 253 ACA--GATTATGATCTATATTTATTTAAAGA--TGCTTACGGCTATCCCG 298
BSNT_00363___ 304 CA--AGG-------GACAGAAGTCATT---AACCCTAATACGTTTTCTTC 341
|| ||| ||.|||| | ||.||.||
BL01663 299 CAGTAGGATCTTCTGAAAGAA-----TGGGAAACCAAA------------ 331
BSNT_00363___ 342 TTTTATTTATGCAAATGCAGACG----------CCCAAAACACGACGGAT 381
||| |||| ||..|| |||.|.||| |.|.|||
BL01663 332 --------ATG-AAAT-CATCCGCTTGGATGTTCCCGAGACA-GGCCGAT 370
BSNT_00363___ 382 ACCTT-------TTATGT-GAAAGTGTCACGAGGCACCTATACCGGAAAC 423
||.|| |.|||| .|||| || ||..|.|||..|||
BL01663 371 ACATTGCGGTCGTCATGTCTAAAG----AC--GGTTCATATGACGG---- 410
BSNT_00363___ 424 AT--GTATTTTACACTTTCAATTGAA------GACCGAATCAAATCAGGC 465
.| |.|||||||| .|.||||| |||.||||.|| .
BL01663 411 CTGGGGATTTTACA----GACTTGAATTTATCGACAGAATGAA------G 450
BSNT_00363___ 466 AGCGGAACATTCCAATTCAGCGGCG-------CTGCTGAAAATAAAGGAA 508
|||||..| ||...||||| ||.| |..
BL01663 451 AGCGGTGC-------TTATACGGCGAATTTGTCTCC-----------GTC 482
BSNT_00363___ 509 ATACAAGCCTTAGCCCC---TCAGG-------TTCT---GATTCCAGCGT 545
||.|| .||.|..||| .|||| |||| |.|.||..||
BL01663 483 ATCCA--TCTCAAGCCCGGGACAGGGAGTCGTTTCTCCGGTTGCCGCCG- 529
BSNT_00363___ 546 GATCAAGGTTGATTTAACAAACCAATCCGGGATACCGCGTGATGCCATTG 595
||||..||| ||| ||.||.|| ||||||
BL01663 530 --TCAATCTTG----------CCA-------ATGCCTCG----GCCATT- 555
BSNT_00363___ 596 TAACCAGA----------GTTCAGACAACCGCCACTCAAACACCAAGCC- 634
||.|| || ||.||.||...|| |||
BL01663 556 ---CCCGAAGGAGCGACTGT---GAAAAGCGTTTCT----------GCCG 589
BSNT_00363___ 635 AGGGAA------ATACACG--------CCACCTGATCATGACGAGCGAA- 669
|||||| ||.||.| .||||| || ||.|||
BL01663 590 AGGGAACGATATATCCAAGTCTCGGACACACCT-------AC-AGAGAAG 631
BSNT_00363___ 670 -----AACAACGA--ATGGCGCCGTGCTCTTGTAAACAGCTCGACTTCAG 712
|||||.|| |.|||| |.|.|.|.||| |||..|||||
BL01663 632 TCCTGAACAAGGAAGAAGGCG------TTTGGCACACA--TCGGTTTCAG 673
BSNT_00363___ 713 G-GTCTTATGATATCTCTTTGTCAGATC---------AACT--------C 744
| |.|..| ||.||| .|.|||| |||| |
BL01663 674 GCGGCACA------CTGTTT-CCGGATCTAAAGCCTGAACTTGCGCTTCC 716
BSNT_00363___ 745 AGTGTGGCAAA--GGTATGGAGTTTTAAATATAATACATTAGC---GA-C 788
.|| |||| |..|||||.|.|.|.|||..||.|..|.|| || |
BL01663 717 CGT----CAAAACGACATGGAATGTGAGATACTATTCGCTCGCTTGGAGC 762
BSNT_00363___ 789 AG--------CCAGATCGACGATGAGCAACGTAAAAGCAAAAATAGATTA 830
|| ..||||||.| |||.|..||.|.|| ||||
BL01663 763 AGTTCAACTTGGAGATCGCC-----GCAGCTGAAGATCA-------ATTA 800
BSNT_00363___ 831 TGAATACGACGTGACAAA--GCAGTTTTAA 858
|.|||||||....|||.| || |..|||
BL01663 801 TCAATACGATTCAACATACGGC--TGGTAA 828
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