Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00730 and BL01660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence pep-align/BSNT_00730___ydaB.1.5803.seq
# -bsequence pep-align/BL01660___ydaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00730___ydaB-BL01660___ydaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00730___ydaB-BL01660___ydaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00730___ydaB
# 2: BL01660___ydaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity: 264/504 (52.4%)
# Similarity: 355/504 (70.4%)
# Gaps: 2/504 ( 0.4%)
# Score: 1451.0
#
#
#=======================================
BSNT_00730___ 1 METLQHLILHDMPNSEEIEAVKSGDHTLTYKGYRKRINQLANAMLQKGIQ 50
|.|||.||.|.|..|:.:||:..||.|.|:|.|.:|:||||:.:|::|:|
BL01660___yda 1 MSTLQQLINHHMETSDGLEALSGGDRTFTFKAYHQRVNQLAHYLLEEGVQ 50
BSNT_00730___ 51 KGDRVALLCKNGHPASTVMFAALEIGAVVVPVSWQLKPYEMTGILKASEP 100
|||.:|:||||.|....::.|:|:|||.|||:||||..||:.|||....|
BL01660___yda 51 KGDHIAVLCKNNHHFPVILLASLKIGATVVPLSWQLTSYELKGILNNCRP 100
BSNT_00730___ 101 KAMFYGAEFKEILDEVLPELSSLCVTMETGTAYETSAEFEALFAGPDHLP 150
|.|||..||.:||..:..:| ..|:.:|.|....|:.:||:||.......
BL01660___yda 101 KVMFYDLEFADILTPLREQL-QFCLMIEAGAGMNTTEQFESLFKNRPLKV 149
BSNT_00730___ 151 ETEMVSPDDTALLMFTSGTTGNPKRCMITHGGIYRYVKKSNSSIARMKGL 200
|.|.|:..|.||::||||||||||.||:.||.:..|:.:.|....::||.
BL01660___yda 150 EAEQVTEHDLALMLFTSGTTGNPKGCMVNHGSLAAYLTEVNVKSKQLKGT 199
BSNT_00730___ 201 RFLACHPIYHTSALICIMLGTFAETTFVFTKDQDPVHMLKVIEEEKIQTV 250
||||.||:||.|:|..:....|......|..|.:|..:|:.||:::|..:
BL01660___yda 200 RFLASHPLYHMSSLNHVFQAAFEGIALYFLWDPEPFEILQEIEKKRIHMM 249
BSNT_00730___ 251 MALPVFYTYLLEAWETHQTDLSSLVILMTGGTKVPSSLIRRYLDIGIPLA 300
||.|..|||:||..:.|..||||:.:|::||||||:.||:.|.|.||.:.
BL01660___yda 250 MAFPSVYTYMLEEMKRHPFDLSSVKMLVSGGTKVPARLIKEYNDHGIMMV 299
BSNT_00730___ 301 HGYGSTEAWGISTWTPDMGMDKAASAGKPVAGVKVKVEDPLTGEELPQGE 350
.||||||||.:|.|.||||.||..|||||:..|.:|:|||.|.||||.||
BL01660___yda 300 QGYGSTEAWTVSVWRPDMGWDKVTSAGKPIPQVSIKIEDPDTHEELPTGE 349
BSNT_00730___ 351 IGEIVVHTPFLFKGYEDNPEATAKVLQNGWFRTGDSGYVDEDGFIFITGR 400
:||:||.:|::|:||..||.||.|||::|||..||||.:|||||::||||
BL01660___yda 350 VGEVVVKSPYVFEGYYQNPSATQKVLKDGWFYMGDSGKLDEDGFLYITGR 399
BSNT_00730___ 401 YKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVK 450
|||||:|||||:|||||||:|.|:||::|:||:|:||.:|||.|:|::||
BL01660___yda 400 YKDVIVYGGDNIYPDQVEEIIDQVPGVVESAVIGVPDEMYGEVPRAYVVK 449
BSNT_00730___ 451 NGGQRITEEDVIAFCKERLSAYKIPEVEFVNELPKNNLGKVKKDVLRNQA 500
|....:.:||:||:||||||.|||||:.|::.||||.|||:.|..||..|
BL01660___yda 450 NESAGLKKEDIIAYCKERLSDYKIPEIVFIDSLPKNRLGKIVKKDLRELA 499
BSNT_00730___ 501 VHS- 503
|..
BL01660___yda 500 VKGQ 503
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