Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00447 and BL01659

See DNA alignment / Visit BSNT_00447 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence pep-align/BSNT_00447___ycbJ.1.5803.seq
#    -bsequence pep-align/BL01659___ycbJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00447___ycbJ-BL01659___ycbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00447___ycbJ-BL01659___ycbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00447___ycbJ
# 2: BL01659___ycbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     186/306 (60.8%)
# Similarity:   232/306 (75.8%)
# Gaps:           3/306 ( 1.0%)
# Score: 1014.5
# 
#
#=======================================

BSNT_00447___      1 MTNLNEKQLITEIVGLARSQGLTVHSENAQLNETGMDFQVVFAKDDTGMP     50
                     ||.:||:  |...:.||...||.:..::|::||:|||||||||:|:.|..
BL01659___ycb      1 MTTVNEQ--IEHTLKLAEKHGLRLKRKHAEINESGMDFQVVFAEDEAGKS     48

BSNT_00447___     51 WVLRKPRRSDVVERASAEGITLAFLRANLTADVPDWRIHTPELIAYPMLK    100
                     ||||||||.||:|||..||..|..|:..|.|.|||||||||||||||.|.
BL01659___ycb     49 WVLRKPRRDDVIERAVYEGKVLKLLQNRLPAAVPDWRIHTPELIAYPELP     98

BSNT_00447___    101 GTPAAGIDLEQKQYVWNMDHQPPSDDFVRTLADILAELHGTDQISAGQSG    150
                     |.|||.||::.|.|||||:|:||::.|.|:||..||.|||.|...|.::|
BL01659___ycb     99 GVPAAVIDMDIKNYVWNMEHEPPAEAFTRSLAKTLALLHGIDHKDAEEAG    148

BSNT_00447___    151 IEVIRPEDFRQMTADSMVDVKNKLGVSTTLWERWQKWIDDDAYWPGFSSL    200
                     :.|:.|:|.||..|:.|..:|::||||..||||||||:.||:|||..:..
BL01659___ycb    149 MHVMNPDDVRQTKAEHMERIKSELGVSAELWERWQKWLSDDSYWPEHTVF    198

BSNT_00447___    201 IHGDLHPPHILIDQNERVTGLLDWTEAKVADPAKDFVLYQTIFGEKETAR    250
                     ||||||||||||||::.:||||||||||:|||||||:|||||.||.||||
BL01659___ycb    199 IHGDLHPPHILIDQHQSITGLLDWTEAKIADPAKDFLLYQTILGEAETAR    248

BSNT_00447___    251 LLEYYNQAGGRIWAKMQEHISEMQAAYPMEIAKLALQTQQEEHINMALEA    300
                     |:.||.:.|||:|.:|:|||.||||||.:||...||||:||||:.|||:|
BL01659___ycb    249 LISYYEEEGGRVWPRMKEHIKEMQAAYGIEIGMFALQTKQEEHLKMALDA    298

BSNT_00447___    301 LGVKPG    306
                     |||.. 
BL01659___ycb    299 LGVTQ-    303


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.