Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00447 and BL01659
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00447___ycbJ.1.5803.seq
# -bsequence dna-align/BL01659___ycbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00447___ycbJ-BL01659___ycbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00447___ycbJ-BL01659___ycbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00447___ycbJ
# 2: BL01659___ycbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 998
# Identity: 608/998 (60.9%)
# Similarity: 608/998 (60.9%)
# Gaps: 163/998 (16.3%)
# Score: 1691.0
#
#
#=======================================
BSNT_00447___ 1 ATGACAAACCTTAACG---AAA---AACAGCTTATCACTGAGATTGTCGG 44
|||||||...|.||.| ||| |||| || ||.|.|.|
BL01659___ycb 1 ATGACAACTGTAAATGAGCAAATTGAACA---TA-CATTAAAA------- 39
BSNT_00447___ 45 GCTTGC------ACGCAGCCAAGGTTTGACGGTTCATTCTGAGAAC---- 84
||||| ||.|.||| || ||| |||| |||
BL01659___ycb 40 -CTTGCGGAAAAACACGGCC-----TT--CGG------CTGA-AACGAAA 74
BSNT_00447___ 85 ----GCGCAATTGAATGAAACCGGAATGGACTTTCAAGTTGTATTTGCCA 130
|||.||.|.||.||..||||.|||||.||||||||.||.|||||..
BL01659___ycb 75 GCATGCGGAAATCAACGAGTCCGGCATGGATTTTCAAGTCGTTTTTGCAG 124
BSNT_00447___ 131 AGGACGACACAGGTATGCCATGGGTGCTGCGAAAACCGCGGCGAAGTGAT 180
|.||.||..||||||.|...||||||.||.|||||||||||||....|||
BL01659___ycb 125 AAGATGAAGCAGGTAAGAGTTGGGTGTTGAGAAAACCGCGGCGCGACGAT 174
BSNT_00447___ 181 GTTGTGGAAAGAGCATCTGCA-GAAGGCATAACGCT--------TGC--- 218
||..|.|||||.||| .||.| |||||.|.|..||| |||
BL01659___ycb 175 GTGATTGAAAGGGCA-GTGTATGAAGGGAAAGTGCTGAAGCTGCTGCAAA 223
BSNT_00447___ 219 -CTTTCTCCGCGCGAATTTGACTGCTGATGTGCCGGATTGGAGAATTCAT 267
|..|||.|.|||| |.|||||||||||||.|.||||||
BL01659___ycb 224 ACCGTCTTCCCGCG------------GCTGTGCCGGATTGGCGCATTCAT 261
BSNT_00447___ 268 ACACCGGAATTGATCGCTTACCCAATGTTAAAAGGAAC----------GC 307
||.||.|||.||||.||.||.|| |||.| ||
BL01659___ycb 262 ACTCCCGAACTGATTGCATATCC----------GGAGCTTCCGGGTGTGC 301
BSNT_00447___ 308 CGGCTGCTGGAATTGACTTGGAACA-AAAGCAATATGTATGGAATATGGA 356
|.||.||.|..||||||.||| ||| .|||.|.||.||||||||.|||||
BL01659___ycb 302 CTGCCGCAGTCATTGACATGG-ACATCAAGAATTACGTATGGAACATGGA 350
BSNT_00447___ 357 TCATCAGCCGCCGTCAGACGACTTTGTCCGCACACTTGCCGACATA--CT 404
.|||.||||.|||.|.||.|..|||..|.|..|| |||.||| |.| ||
BL01659___ycb 351 GCATGAGCCTCCGGCTGAAGCGTTTACCAGGTCA-TTGGCGA-AAACGCT 398
BSNT_00447___ 405 GGCTGAATTACATGGCACGGATCA-AATATCTGCTGGGC-------AATC 446
.||...|||.||.||||..||||| || ||.| ||.|
BL01659___ycb 399 CGCGCTATTGCACGGCATCGATCATAA--------GGACGCAGAAGAAGC 440
BSNT_00447___ 447 CGGAATAGAAGTGATAAGGCCAGAAGATTTCAGGCAAATGACAGCAGACT 496
.||.||..|.|||||.|..||.||.||..|||||||.|..|.||||||..
BL01659___ycb 441 GGGCATGCATGTGATGAATCCGGATGACGTCAGGCAGACAAAAGCAGAGC 490
BSNT_00447___ 497 CTATG--GTTGATGTGAAGAATAAGCTTGGCG-TATCTACGACGCTTTGG 543
.|||| |..|| |.||.|.|.||||.||.| ||.|..||| |||.|||
BL01659___ycb 491 ATATGGAGCGGA--TCAAAAGTGAGCTCGGGGTTAGCGCCGA-GCTCTGG 537
BSNT_00447___ 544 GAAAGATGGCAAAAGTGGATAGATGATGATGCATACTGGCC--------- 584
||||||||||||||||||.|...|||.||..|.||.|||||
BL01659___ycb 538 GAAAGATGGCAAAAGTGGCTGTCTGACGACTCGTATTGGCCTGAACATAC 587
BSNT_00447___ 585 -GGGTTTCTCTTCTTTGATACACGGCGATCTCCACCCGCCGCATATTCTT 633
|.|||| ||.||||||||..|.|||||.|||||||||.|.
BL01659___ycb 588 GGTGTTT----------ATCCACGGCGACTTGCACCCTCCGCATATTTTG 627
BSNT_00447___ 634 ATCGACCAAAATGAACGTGTCACAGGACTTCTGGATTGGACAGAAGCGAA 683
||.|||||..||.|..|..|.||.||.||..||||||||||||||||.||
BL01659___ycb 628 ATTGACCAGCATCAGAGCATAACTGGGCTGTTGGATTGGACAGAAGCAAA 677
BSNT_00447___ 684 GGTTGCCGATCCAGCCAAGGATTTTGTTCTTTATCAAACCATTTTCGGGG 733
..|.|||||.||.||.||.||.|||.|..|.||.||.||.|||||.||.|
BL01659___ycb 678 AATCGCCGACCCGGCTAAAGACTTTCTGTTATACCAGACGATTTTAGGAG 727
BSNT_00447___ 734 AAAAAGAAACTGCCCG-----TTTACTTGAATACTATAATCAAGCAGGCG 778
||...|||||.||.|| |.| || ||.||..|..|||.|||.|
BL01659___ycb 728 AAGCCGAAACCGCACGGCTCATCT-CT----TATTACGAAGAAGAAGGAG 772
BSNT_00447___ 779 GCCGGATATGGGCAAAAATGCAGGAACACATTTCAGAGATGCAGGCGGCG 828
|.||..|.|||.|....|||.|.||.||.|||..|||.||||||||.||.
BL01659___ycb 773 GACGCGTCTGGCCGCGGATGAAAGAGCATATTAAAGAAATGCAGGCCGCC 822
BSNT_00447___ 829 TATCCG--ATGGAAATCGCCAAGCTCGCTCTGCAAACACAGCAGGAGGAA 876
|| || ||.|||||||.||.|.|.||.||.|||||..|.||.||.||.
BL01659___ycb 823 TA--CGGCATCGAAATCGGCATGTTTGCCCTTCAAACGAAACAAGAAGAG 870
BSNT_00447___ 877 CACATCAATATGGCGCTGGAAGCACTTGGTGTAAAACCGGGTTAA--- 921
|||.|.||.|||||||||||.||.|||||.||.|.|| ||
BL01659___ycb 871 CACTTGAAAATGGCGCTGGACGCGCTTGGCGTCACAC------AATAA 912
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