Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00439 and BL01646

See DNA alignment / Visit BSNT_00439 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00439___ycbD.1.5803.seq
#    -bsequence pep-align/BL01646___ybcD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00439___ycbD-BL01646___ybcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00439___ycbD-BL01646___ybcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00439___ycbD
# 2: BL01646___ybcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 488
# Identity:     394/488 (80.7%)
# Similarity:   437/488 (89.5%)
# Gaps:           0/488 ( 0.0%)
# Score: 2066.0
# 
#
#=======================================

BSNT_00439___      1 MSVITEQNTYLNFIKGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDV     50
                     |||..|..||.|||.|.|||::||.|.:..||||..||||.||.|:.|||
BL01646___ybc      1 MSVAAESKTYFNFINGRWVKAESGGMEQSLNPADTRDIVGLVQKSSIEDV     50

BSNT_00439___     51 ERAVAAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGK    100
                     :|||.||.:||.|||||:||||||:|||.||||||||:|||.||||||||
BL01646___ybc     51 DRAVEAAKQAKKAWRKLSGAERGQFLYKAADIMEQRLDEIAECATREMGK    100

BSNT_00439___    101 TLPEAKGETARGIAILRYYAGEGMRKTGDVIPSTDKAALMFTTRVPLGVV    150
                     |||||||||||||||||||||||:|||||||||||.:|.|:|.|||||||
BL01646___ybc    101 TLPEAKGETARGIAILRYYAGEGLRKTGDVIPSTDSSAFMYTDRVPLGVV    150

BSNT_00439___    151 GVISPWNFPVAIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAG    200
                     |||||||||||||||||||||:|||||||||||||||||.|:|:||||||
BL01646___ybc    151 GVISPWNFPVAIPIWKMAPALIYGNTVVIKPATETAVTCLKVISCFEEAG    200

BSNT_00439___    201 LPAGVINLVTGPGSVVGQGLAEHDGVNAVTFTGSNQVGKIIGQAALARGA    250
                     :|:||:|.||||||..||.||||..||.:|||||||.|||||:.|..|||
BL01646___ybc    201 IPSGVVNAVTGPGSSAGQRLAEHPDVNGITFTGSNQTGKIIGRTAFERGA    250

BSNT_00439___    251 KYQLEMGGKNPVIVADDADLEAAAEAVITGAFRSTGQKCTATSRVIVQSE    300
                     ||||||||||||||||||||:.|.||||:||||||||||||||||||.:.
BL01646___ybc    251 KYQLEMGGKNPVIVADDADLDIAVEAVISGAFRSTGQKCTATSRVIVLNG    300

BSNT_00439___    301 IYERFKEKLLQRTKDITIGDSLKEDVWMGPIASKNQLDNCLSYIEKGKQE    350
                     :|:||||||||:||:|||||||||||||||||:|.|||||||||.|||||
BL01646___ybc    301 VYDRFKEKLLQQTKEITIGDSLKEDVWMGPIANKQQLDNCLSYIAKGKQE    350

BSNT_00439___    351 GASLLIGGEKLENGKYQNGYYVQPAIFDNVTSEMTIAQEEIFGPVIALIK    400
                     ||.|:.|||:|.:|||:||||::|||||||||.|||||||||||||||||
BL01646___ybc    351 GADLIFGGERLADGKYENGYYIRPAIFDNVTSGMTIAQEEIFGPVIALIK    400

BSNT_00439___    401 VDSMEEALNIANDVKFGLSASIFTENIGRMLSFIDEIDAGLVRINAESAG    450
                     .|::||||..||||||||||||||:||.|||||.|||:|||:|:||||||
BL01646___ybc    401 ADTLEEALETANDVKFGLSASIFTQNIRRMLSFTDEIEAGLIRVNAESAG    450

BSNT_00439___    451 VELQAPFGGMKQSSSHSREQGEAAKDFFTAIKTVFVKP    488
                     |||||||||:|||||||||||||||:||||:|||||||
BL01646___ybc    451 VELQAPFGGVKQSSSHSREQGEAAKEFFTAVKTVFVKP    488


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