Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00436 and BL01645

See DNA alignment / Visit BSNT_00436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00436___ycbC.1.5803.seq
#    -bsequence pep-align/BL01645___kdgD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00436___ycbC-BL01645___kdgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00436___ycbC-BL01645___kdgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00436___ycbC
# 2: BL01645___kdgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     250/308 (81.2%)
# Similarity:   283/308 (91.9%)
# Gaps:           0/308 ( 0.0%)
# Score: 1319.0
# 
#
#=======================================

BSNT_00436___      1 MSRIRKAPAGILGFPVAPFNTQGKLEEEALFQNIEFLLNEGLEAIFIACG     50
                     ||::||||.|||||||||||.:||||||||::||.|||:|||||:|||||
BL01645___kdg      1 MSQLRKAPEGILGFPVAPFNREGKLEEEALYENIRFLLDEGLEAVFIACG     50

BSNT_00436___     51 SGEFQSLSQKEYEQMVEVAVSAAGGKVPVYTGVGGNLSTALDWAQLSEKK    100
                     ||||||||.||||||||:|||||.|||||||||||||||||:||::||:|
BL01645___kdg     51 SGEFQSLSTKEYEQMVEIAVSAADGKVPVYTGVGGNLSTALEWARISEEK    100

BSNT_00436___    101 GADGYLILPPYLVHGEQEGLYQYAKTIIESTDLNAILYQRDNAVLSVEQI    150
                     ||||||||||||:||||||||||.||||||||||||:||||||||::|||
BL01645___kdg    101 GADGYLILPPYLIHGEQEGLYQYTKTIIESTDLNAIIYQRDNAVLTLEQI    150

BSNT_00436___    151 KRLTECEQLVGVKDGVGNMDLNINLVYTIGDRLGWLNGMPMAEVTMPAYL    200
                     :|||:.|||||:|||:|:|.|||:|.|||||||||||||||||||||||.
BL01645___kdg    151 QRLTDLEQLVGLKDGIGDMALNISLSYTIGDRLGWLNGMPMAEVTMPAYA    200

BSNT_00436___    201 PIGFHSYSSAISNYIPHISRMFYDALKNGNDELVKELYRHVILPINDIRK    250
                     ||||.||||||||||||||||||:||.||||.||||:|..||:|||:|||
BL01645___kdg    201 PIGFTSYSSAISNYIPHISRMFYEALLNGNDRLVKEIYEQVIIPINEIRK    250

BSNT_00436___    251 QRKGYAVSLIKAGMEIMGLNVRNTARPPVGPVEKDHYQQLEAILKQAADR    300
                     .||||||||||||||||||:|:||||||:.||||:|.:|||.|||.|..|
BL01645___kdg    251 LRKGYAVSLIKAGMEIMGLHVKNTARPPIVPVEKEHCRQLENILKNAMAR    300

BSNT_00436___    301 FPKKAATV    308
                     :||..|.:
BL01645___kdg    301 YPKTTAAL    308


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