Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00434 and BL01641

See DNA alignment / Visit BSNT_00434 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00434___ycbB.1.5803.seq
#    -bsequence pep-align/BL01641___glnL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00434___ycbB-BL01641___glnL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00434___ycbB-BL01641___glnL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00434___ycbB
# 2: BL01641___glnL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     210/315 (66.7%)
# Similarity:   253/315 (80.3%)
# Gaps:           5/315 ( 1.6%)
# Score: 1034.0
# 
#
#=======================================

BSNT_00434___      1 MRFFIADDDRAVRSILRQIIEDEDLGEAVGEADDGSQVEGHMLQFKQIDI     50
                     ||||||||||||||||:||||||||||..|||:||..:|||:|..:||||
BL01641___gln      1 MRFFIADDDRAVRSILKQIIEDEDLGEVAGEAEDGCDLEGHVLNLQQIDI     50

BSNT_00434___     51 LLIDLLMPGRDGIETIRQIQNTYSGKIIMISQVEAKEMVGEAYSLGIEYF    100
                     |.:|||||.||||||:|.:...:|||||||||||:|||:||||||||||:
BL01641___gln     51 LFVDLLMPLRDGIETVRHLHGVFSGKIIMISQVESKEMIGEAYSLGIEYY    100

BSNT_00434___    101 IHKPINRIEIVTVLQKVKERIELEHSIGAIQHSLSRLVN-RTERKARPQQ    149
                     ||||||||||:.|:||||||||||.||..||.||:|||: ....|...::
BL01641___gln    101 IHKPINRIEILNVIQKVKERIELERSIHDIQSSLNRLVSLGGGGKNGFRE    150

BSNT_00434___    150 KSDSGLKEAGTFLLSELGMMGEGGAHDLMAVLQYLAEHEQSEPHEKQSPS    199
                     ||   ::|.|.|||||||::||.|:.||:|:||||.:.||:..:||..|.
BL01641___gln    151 KS---IQETGEFLLSELGIVGESGSQDLIAILQYLFDDEQTSLYEKDFPP    197

BSNT_00434___    200 LKQIFTQVAVRKLGTGASQTEVNREMKASEQRIRRAIIHSLHHFASLGTT    249
                     |||||.|:||:|||..||..|:|||:||||||||||:.|||:||||||.|
BL01641___gln    198 LKQIFHQIAVQKLGPAASPAEINREVKASEQRIRRAVSHSLNHFASLGLT    247

BSNT_00434___    250 DFSNPKFETYASKFFDFPVVSQKIKELQSKDAKPLAPARINMKKFIHVFF    299
                     |||||:||:|||:||||.|:|:|:||||...|..|..||:|.||||.|||
BL01641___gln    248 DFSNPRFESYASRFFDFTVISKKMKELQKDSAAVLPSARVNTKKFIQVFF    297

BSNT_00434___    300 LEAKLLHETMKQRRI    314
                     ||||.|.|:..:|. 
BL01641___gln    298 LEAKRLSESAGKRG-    311


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