Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02432 and BL01618
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_02432___pdhC.1.5803.seq
# -bsequence pep-align/BL01618___pdhC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02432___pdhC-BL01618___pdhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02432___pdhC-BL01618___pdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02432___pdhC
# 2: BL01618___pdhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 380/447 (85.0%)
# Similarity: 401/447 (89.7%)
# Gaps: 22/447 ( 4.9%)
# Score: 1871.0
#
#
#=======================================
BSNT_02432___ 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPS 50
||||||||||||||||||||||||||||||:|||||||||||||||||||
BL01618___pdh 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEVNEDDVLAEVQNDKAVVEIPS 50
BSNT_02432___ 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQ 100
|||||||||||||||||||||||||||||||||||||| |||.:||.|.
BL01618___pdh 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYEDLQFKG-DESGEAKAEE- 98
BSNT_02432___ 101 VQSTAEAGKDVAKEEQAQEPAKATGAGQQDQAEVDPNKRVIAMPSVRKYA 150
|::::...||:|..| .:||:.||||||||||||||||
BL01618___pdh 99 -----------AEKQETDAPAEAAEA--NEQADADPNKRVIAMPSVRKYA 135
BSNT_02432___ 151 REKGVDIRKVTGSGNNGRVVKEDIDSFVNGG----AQEAAPQETAAPQET 196
|||||||..|:|||.||||:|||||||:||| |:.|..:|.|.| .
BL01618___pdh 136 REKGVDIVNVSGSGKNGRVLKEDIDSFLNGGTAGDAKAAQAEEKAEP--A 183
BSNT_02432___ 197 AAKPAAA-PAPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVD 245
|.:|||| ..||||||||||||||||||||||||||||||||||||||||
BL01618___pdh 184 AQQPAAAVQVPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVD 233
BSNT_02432___ 246 VTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKT 295
||||||||||||||||||||||||||||||||||||||:|||||||||.|
BL01618___pdh 234 VTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKYPVLNTSIDDNT 283
BSNT_02432___ 296 DEVIQKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKARE 345
||||||||:|||||||||||||||||||||||::||||:|||.|||||||
BL01618___pdh 284 DEVIQKHYYNIGIAADTEKGLLVPVVKNADRKAIFEISNEINELATKARE 333
BSNT_02432___ 346 GKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAIVR 395
|||||||||||||||||||||||||||||||||||||||||||||||:||
BL01618___pdh 334 GKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAVVR 383
BSNT_02432___ 396 DGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 442
|||||||||||||||||||||||||||||||||||||||||||||||
BL01618___pdh 384 DGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 430
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