Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02432 and BL01618
See
Amino acid alignment /
Visit
BSNT_02432 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02432___pdhC.1.5803.seq
# -bsequence dna-align/BL01618___pdhC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02432___pdhC-BL01618___pdhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02432___pdhC-BL01618___pdhC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02432___pdhC
# 2: BL01618___pdhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1361
# Identity: 1075/1361 (79.0%)
# Similarity: 1075/1361 (79.0%)
# Gaps: 100/1361 ( 7.3%)
# Score: 4400.5
#
#
#=======================================
BSNT_02432___ 1 GTGGCATTTGAATTTAAACTTCCAGATATCGGGGAAGGTATCCACGAAGG 50
|||||||||||||||||||||||.||||||||||||||.|||||||||||
BL01618___pdh 1 GTGGCATTTGAATTTAAACTTCCGGATATCGGGGAAGGAATCCACGAAGG 50
BSNT_02432___ 51 CGAAATCGTAAAATGGTTTGTCAAGCCTAACGACGAGGTAGACGAAGATG 100
|||||||||.||||||||.||||||||.||||||||||||.|||||||||
BL01618___pdh 51 CGAAATCGTGAAATGGTTCGTCAAGCCAAACGACGAGGTAAACGAAGATG 100
BSNT_02432___ 101 ATGTACTGGCTGAAGTCCAAAATGATAAAGCAGTAGTAGAAATTCCTTCA 150
|.||..||||.||.||.|||||.|||||||||||.|||||||||||||||
BL01618___pdh 101 ACGTTTTGGCAGAGGTACAAAACGATAAAGCAGTTGTAGAAATTCCTTCA 150
BSNT_02432___ 151 CCTGTTAAAGGAAAAGTATTAGAATTAAAAGTTGAAGAGGGAACGGTTGC 200
||||||||||||||||||||||||||||||||||||||||||||.||.||
BL01618___pdh 151 CCTGTTAAAGGAAAAGTATTAGAATTAAAAGTTGAAGAGGGAACAGTCGC 200
BSNT_02432___ 201 AACTGTTGGACAAACGATTATTACGTTTGATGCACCTGGTTACGAAGATC 250
|||.|||||.||.|||||.||.||.|||||||||||.|||||||||||||
BL01618___pdh 201 AACCGTTGGGCAGACGATCATCACATTTGATGCACCAGGTTACGAAGATC 250
BSNT_02432___ 251 TTCAATTTAAAGGCAGCGACGAGTCTGACGATGCGAAAACTGAAGCACAA 300
|||||||.|||| |||||||.||.|.|||.||||||.|.||
BL01618___pdh 251 TTCAATTCAAAG---GCGACGAATCAGGCGAAGCGAAAGCGGA------- 290
BSNT_02432___ 301 GTTCAGTCAACTGCAGAAGCTGGAAAAGACGTTGCGAAAGAA---GA-GC 346
||||||||.|||| .||||| || ||
BL01618___pdh 291 --------------AGAAGCTGAAAAA---------CAAGAAACTGATGC 317
BSNT_02432___ 347 AAGCTCAAGAGCCTGCAAAAGCTACTGGCGCAGGACAGC--AGGATCAAG 394
| ||||||.||||..| ||| ||| |.||.||||
BL01618___pdh 318 A----------CCTGCAGAAGCAGC-------GGA-AGCAAACGAGCAAG 349
BSNT_02432___ 395 CTGAAGTTGACCCGAACAAACGCGTGATCGCTATGCCTTCCGTACGTAAA 444
|.||.|..||.|||||.||.|||||.||.||.|||||.||.||.||.||.
BL01618___pdh 350 CGGATGCAGATCCGAATAAGCGCGTCATTGCAATGCCATCTGTTCGCAAG 399
BSNT_02432___ 445 TATGCTCGTGAAAAAGGCGTAGACATCCGT-AAGGTTACTGGTTCAGGCA 493
|||||.||.|||||||||||.||.|| ||| ||.|||.|.|||||.||||
BL01618___pdh 400 TATGCCCGCGAAAAAGGCGTTGATAT-CGTGAATGTTTCAGGTTCCGGCA 448
BSNT_02432___ 494 ACAACGGACGTGTTGTAAAAGAAGATATCGACAGCTTTGTAAACGGAGGA 543
|.|||||.||.|||.|.||||||||||||||||||||..|||||||||||
BL01618___pdh 449 AAAACGGCCGCGTTCTGAAAGAAGATATCGACAGCTTCTTAAACGGAGGA 498
BSNT_02432___ 544 ----------GCGC-AAG-------AAGCTGCACCGCAAGAAACAGCTGC 575
.||| ||| |||||| ||||.|.|||
BL01618___pdh 499 ACTGCCGGAGACGCTAAGGCTGCTCAAGCTG------AAGAGAAAGC--- 539
BSNT_02432___ 576 ACCACAAGAAACAGCTGCTA----AACCGGCTGCTGC---ACCAGCTCCA 618
||||.|.||||| | ||||.||.||||| .|.||..||.
BL01618___pdh 540 ------AGAACCTGCTGC-ACAGCAACCTGCAGCTGCGGTTCAAGTGCCT 582
BSNT_02432___ 619 GAGGGCGAATTCCCAGAAACACGCGAAAAAATGAGCGGTATCCGTAAAGC 668
||.|||||||||||.|||||.|||||.|||||||||||.|||||.|||||
BL01618___pdh 583 GAAGGCGAATTCCCTGAAACTCGCGAGAAAATGAGCGGAATCCGCAAAGC 632
BSNT_02432___ 669 AATTGCAAAAGCGATGGTTAACTCTAAACACACTGCTCCTCATGTAACGT 718
.|||||||||||.|||||.|||||.|||||.||.|||||.||.||.||.|
BL01618___pdh 633 CATTGCAAAAGCTATGGTCAACTCAAAACATACCGCTCCACACGTTACAT 682
BSNT_02432___ 719 TAATGGACGAAGTGGACGTAACAAACCTTGTTGCACATCGTAAACAGTTC 768
|||||||||||||.||.||.|||||||||||.||.||.||.||.|||||.
BL01618___pdh 683 TAATGGACGAAGTCGATGTGACAAACCTTGTCGCTCACCGCAAGCAGTTT 732
BSNT_02432___ 769 AAACAAGTTGCTGCTGATCAAGGAATCAAGCTGACTTACTTGCCTTACGT 818
|||||||||||.||||||||||||||.||||||||||||.||||||||||
BL01618___pdh 733 AAACAAGTTGCGGCTGATCAAGGAATTAAGCTGACTTACCTGCCTTACGT 782
BSNT_02432___ 819 TGTAAAAGCTCTTACATCTGCACTGAAAAAATTCCCTGTTTTAAACACGT 868
.|||||||||.|.|||||.||.||||||||||..||.||..|.||.||.|
BL01618___pdh 783 GGTAAAAGCTTTGACATCAGCTCTGAAAAAATATCCAGTCCTGAATACAT 832
BSNT_02432___ 869 CAATTGACGATAAAACAGATGAAGTCATCCAAAAACATTACTTCAACATC 918
||||||||||.||.|||||||||||.||.||.||.||.||||.|||||||
BL01618___pdh 833 CAATTGACGACAATACAGATGAAGTGATTCAGAAGCACTACTACAACATC 882
BSNT_02432___ 919 GGTATCGCTGCTGACACTGAAAAAGGCTTGCTTGTACCGGTTGTGAAAAA 968
|||||.||.||.|||||||||||||||.|||||||.||||||||.|||||
BL01618___pdh 883 GGTATTGCGGCAGACACTGAAAAAGGCCTGCTTGTGCCGGTTGTTAAAAA 932
BSNT_02432___ 969 TGCAGATCGTAAATCTGTCTTTGAAATTTCTGATGAGATCAATGGCCTTG 1018
|||.||.||.|||.|..|.|||||.|||||..|.||.|||||.|..||||
BL01618___pdh 933 TGCGGACCGCAAAGCGATTTTTGAGATTTCAAACGAAATCAACGAGCTTG 982
BSNT_02432___ 1019 CAACAAAAGCTCGTGAAGGCAAGCTTGCTCCAGCTGAAATGAAAGGCGCA 1068
|.||||||||.||.||||||||.||||||||.|||||||||||||||||.
BL01618___pdh 983 CGACAAAAGCACGCGAAGGCAAACTTGCTCCTGCTGAAATGAAAGGCGCT 1032
BSNT_02432___ 1069 TCTTGCACAATTACAAACATCGGTTCTGCCGGCGGACAATGGTTCACTCC 1118
||||||||||||||.||.|||||.|||||||||||.|||||||||||.||
BL01618___pdh 1033 TCTTGCACAATTACGAATATCGGCTCTGCCGGCGGTCAATGGTTCACACC 1082
BSNT_02432___ 1119 GGTTATCAACCATCCAGAAGTTGCGATTCTTGGTATCGGACGCATTGCAG 1168
|||||||||||||||.|||||||||||.|||||.|||||.|||||.||.|
BL01618___pdh 1083 GGTTATCAACCATCCGGAAGTTGCGATCCTTGGAATCGGCCGCATCGCTG 1132
BSNT_02432___ 1169 AAAAAGCGATTGTTCGTGATGGCGAAATCGTAGCAGCTCCAGTCTTAGCT 1218
|.|||||..|.||||||||.|||||||||||.||.||.||.||..|.|||
BL01618___pdh 1133 AGAAAGCTGTCGTTCGTGACGGCGAAATCGTCGCTGCACCTGTTCTGGCT 1182
BSNT_02432___ 1219 CTTTCTCTCAGCTTCGACCACCGTATGATCGACGGAGCAACTGCGCAAAA 1268
||||||||.|||||.||||||||||||||||||||.||||||||.|||||
BL01618___pdh 1183 CTTTCTCTAAGCTTTGACCACCGTATGATCGACGGCGCAACTGCACAAAA 1232
BSNT_02432___ 1269 TGCATTAAATCACATCAAGCGTTTACTGAACGATCCACAATTAATTTTAA 1318
.||.||.|||||||||||||||||.|||||||||||||||||||||||||
BL01618___pdh 1233 CGCGTTGAATCACATCAAGCGTTTGCTGAACGATCCACAATTAATTTTAA 1282
BSNT_02432___ 1319 TGGAGGCGTAA 1329
|||||||||||
BL01618___pdh 1283 TGGAGGCGTAA 1293
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.