Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02422 and BL01614

See DNA alignment / Visit BSNT_02422 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_02422___ykrA.1.5803.seq
#    -bsequence pep-align/BL01614___ykrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02422___ykrA-BL01614___ykrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02422___ykrA-BL01614___ykrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02422___ykrA
# 2: BL01614___ykrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     178/258 (69.0%)
# Similarity:   215/258 (83.3%)
# Gaps:           1/258 ( 0.4%)
# Score: 966.0
# 
#
#=======================================

BSNT_02422___      1 MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLV     50
                     ||.||||||||||||||:|.||.:.::.|::|:..||||||||||:||:|
BL01614___ykr      1 MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMV     50

BSNT_02422___     51 KPILEELGIHSFISYNGQFVVFENQVIYKNPLPENAIRRLLKQADEGKHP    100
                     :|:||||||.||:|||||:||||.:||||||:.|.::..||..:|...||
BL01614___ykr     51 RPVLEELGIDSFVSYNGQYVVFEGEVIYKNPIAEQSLEALLAHSDSCGHP    100

BSNT_02422___    101 VVFMAEDTMKATVADHPHVLEGIGSLKTDYPETDDLFYEGKEIFQLLLFC    150
                     :|||.|:.|::|.|.||.|.|||||||.:.||.|..:::|::|||:||||
BL01614___ykr    101 LVFMGEEGMRSTTAAHPFVDEGIGSLKVNPPEEDRTYFKGRDIFQVLLFC    150

BSNT_02422___    151 QDEEEKAYAAFPEFDLVRWHELSTDVLPHGGSKAEGIKKVIERLPFDIGD    200
                     ..:||:.|:.|.|||||||||.||||||.|||||||||||||:||||..|
BL01614___ykr    151 TQDEEERYSRFKEFDLVRWHERSTDVLPSGGSKAEGIKKVIEKLPFDRED    200

BSNT_02422___    201 TYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKPVDEDGIAYAA    250
                     |||||||||||||||:.||||||||||||||:||||:|||||||||.||.
BL01614___ykr    201 TYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKPVDEDGIQYAV    250

BSNT_02422___    251 KELGLLK-    257
                     :.||||| 
BL01614___ykr    251 EALGLLKS    258


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