Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02416 and BL01612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence pep-align/BSNT_02416___ykqB.1.5803.seq
# -bsequence pep-align/BL01612___ktrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02416___ykqB-BL01612___ktrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02416___ykqB-BL01612___ktrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: BL01612___ktrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 194/222 (87.4%)
# Similarity: 206/222 (92.8%)
# Gaps: 3/222 ( 1.4%)
# Score: 957.0
#
#
#=======================================
BSNT_02416___ 1 MKKEFAVIGLGRFGGSICKALSEEGVEVMAMDIDEDKVNEYAKIASHAVI 50
|||||||||||||||||||||||||:||||:|.|||:||||||||:||||
BL01612___ktr 1 MKKEFAVIGLGRFGGSICKALSEEGLEVMAIDRDEDRVNEYAKIATHAVI 50
BSNT_02416___ 51 GDSTDESVLKNLGLRNFDHVIVAIGENIQASILTTLILKELGVHTITVKA 100
||:||||||||||||||||||||||||||||||||||||||||..|||||
BL01612___ktr 51 GDTTDESVLKNLGLRNFDHVIVAIGENIQASILTTLILKELGVKMITVKA 100
BSNT_02416___ 101 QNDYHEKVLSKIGADHIVHPERDMAKRIAHNIVSNNVLDYLELSEEHSLV 150
|||||||||||||||.||||||:|.|||||||||||||||||||:|||||
BL01612___ktr 101 QNDYHEKVLSKIGADRIVHPEREMGKRIAHNIVSNNVLDYLELSDEHSLV 150
BSNT_02416___ 151 EIVANSRLAGNTLLDLDIRAKYGINIVAIKRGKEVIVSPLATEVIHQEDI 200
||.||.:|||||||||||||:||||||||||||||||||||||.|.::||
BL01612___ktr 151 EIAANGKLAGNTLLDLDIRARYGINIVAIKRGKEVIVSPLATEEIQKDDI 200
BSNT_02416___ 201 LIVIGSVTDISRFEKRVL-HTK 221
||||||..||.||||:|. |
BL01612___ktr 201 LIVIGSNPDIERFEKKVFQH-- 220
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