Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02416 and BL01612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02416___ykqB.1.5803.seq
# -bsequence dna-align/BL01612___ktrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02416___ykqB-BL01612___ktrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02416___ykqB-BL01612___ktrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: BL01612___ktrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 508/668 (76.0%)
# Similarity: 508/668 (76.0%)
# Gaps: 7/668 ( 1.0%)
# Score: 1907.5
#
#
#=======================================
BSNT_02416___ 1 ATGAAAAAAGAATTTGCGGTAATTGGGCTGGGCCGTTTTGGTGGCAGTAT 50
|||||||||||||||||.||||||||.||.|||||.||.||.|||||.||
BL01612___ktr 1 ATGAAAAAAGAATTTGCAGTAATTGGACTCGGCCGGTTCGGCGGCAGCAT 50
BSNT_02416___ 51 TTGCAAAGCATTAAGCGAAGAAGGCGTCGAGGTTATGGCAATGGATATCG 100
||||||||||||.||.||||||||..|.||.||.|||||.||.||.|..|
BL01612___ktr 51 TTGCAAAGCATTGAGTGAAGAAGGGCTTGAAGTAATGGCGATCGACAGAG 100
BSNT_02416___ 101 ATGAAGATAAAGTCAACGAGTATGCCAAGATTGCATCTCACGCAGTTATC 150
||||||||...||.|||||.||.|||||.||||||.|.||.||.||.||.
BL01612___ktr 101 ATGAAGATCGCGTAAACGAATACGCCAAAATTGCAACACATGCTGTGATA 150
BSNT_02416___ 151 GGTGATTCGACAGACGAATCTGTCCTGAAAAATTTAGGCCTGCGAAATTT 200
||.||..|.||||||||||||||.||||||||..|.||.|||||.|||||
BL01612___ktr 151 GGAGACACTACAGACGAATCTGTGCTGAAAAACCTTGGACTGCGCAATTT 200
BSNT_02416___ 201 TGACCACGTTATTGTAGCAATCGGGGAAAATATTCAAGCGAGTATTTTAA 250
||||||.||.||||||||.||||||||.||.|||||||||||.|||||.|
BL01612___ktr 201 TGACCATGTCATTGTAGCGATCGGGGAGAACATTCAAGCGAGCATTTTGA 250
BSNT_02416___ 251 CGACACTCATTCTGAAAGAACTTGGCGTCCATACGATTACAGTTAAAGCG 300
|.||.||.||..|.|||||.|||||.||..|.|.||||||.||.|||||.
BL01612___ktr 251 CAACGCTGATCTTAAAAGAGCTTGGTGTGAAAATGATTACCGTAAAAGCT 300
BSNT_02416___ 301 CAGAACGATTATCACGAAAAAGTGCTGTCTAAAATTGGTGCGGATCACAT 350
||.|||||||||||.||||||||..|.||.|||||.||.|||||.|..||
BL01612___ktr 301 CAAAACGATTATCATGAAAAAGTATTATCCAAAATCGGAGCGGACCGGAT 350
BSNT_02416___ 351 CGTCCACCCGGAACGCGATATGGCAAAACGAATTGCGCATAATATCGTGT 400
|||.||||||||.||.||.||||.||||.|.||.||.||.||.|||||.|
BL01612___ktr 351 CGTTCACCCGGAGCGTGAAATGGGAAAAAGGATCGCCCACAACATCGTCT 400
BSNT_02416___ 401 CCAACAATGTACTTGACTATTTGGAGCTGTCTGAAGAGCATAGTCTTGTT 450
||||||||||.|||||.|||.||||.||.|||||.||.||.||.|||||.
BL01612___ktr 401 CCAACAATGTGCTTGATTATCTGGAACTTTCTGATGAACACAGCCTTGTC 450
BSNT_02416___ 451 GAAATCGTAGCTAACAGCCGCCTGGCTGGAAATACGCTTCTCGATTTAGA 500
|||||||.|||.|||.||...|||||.||||||||.||.||.||..|.||
BL01612___ktr 451 GAAATCGCAGCGAACGGCAAACTGGCCGGAAATACACTGCTTGACCTTGA 500
BSNT_02416___ 501 TATTCGCGCAAAATACGGTATTAACATCGTAGCCATAAAAAGGGGCAAGG 550
|||.||.||.|.||||||.|||||.||.||.||.||.||..||||.||||
BL01612___ktr 501 TATCCGGGCCAGATACGGAATTAATATTGTTGCGATCAAGCGGGGAAAGG 550
BSNT_02416___ 551 AAGTCATCGTATCACCGCTTGCAACCGAAGTCATCCACCAAGAAGATATA 600
|||||||||||||.||||||||.||.||||..||.||..||||.|||||.
BL01612___ktr 551 AAGTCATCGTATCTCCGCTTGCCACTGAAGAAATTCAGAAAGACGATATT 600
BSNT_02416___ 601 CTCATTGTTATTGGATCAGTTACAGACATCTCCCGTTTCGAAAAAAGAGT 650
.|.||.||.||.||.|||..|.|.|||||.....|.||.|||||||.|||
BL01612___ktr 601 TTAATCGTCATCGGCTCAAATCCTGACATTGAGAGATTTGAAAAAAAAGT 650
BSNT_02416___ 651 TCTTCATACA--AAATAG 666
..|||| ||| ||
BL01612___ktr 651 CTTTCA-ACATTAA---- 663
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