Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02406 and BL01608
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence pep-align/BSNT_02406.1.5803.seq
# -bsequence pep-align/BL01608___ykpA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02406-BL01608___ykpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02406-BL01608___ykpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02406
# 2: BL01608___ykpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 551
# Identity: 401/551 (72.8%)
# Similarity: 429/551 (77.9%)
# Gaps: 103/551 (18.7%)
# Score: 2062.5
#
#
#=======================================
BSNT_02406 1 MIAVNNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGE 50
||||.||||||||:||||||||||.||||||||||||||||||||:||||
BL01608___ykp 1 MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGE 50
BSNT_02406 51 IEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKD 100
||||||:|||||||||||||||||||||:||||||||||:||||||||||
BL01608___ykp 51 IEPQTGEVHMSPGERLAVLKQNHFEYEEHEVLKVVIMGHRRLYEVMQEKD 100
BSNT_02406 101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHT 150
||||||||||||||||||||||||||||||||.|||||||||||.|:|||
BL01608___ykp 101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAEGEAAILLKGLGIPEELHT 150
BSNT_02406 151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN 200
|||||||||||||||||||||||||||||||||||||:||||||||||||
BL01608___ykp 151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDIQAIQWLEEFLIN 200
BSNT_02406 201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKL 250
|||||||||||||||||||||||||||||||||||||||||||||||||:
BL01608___ykp 201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKM 250
BSNT_02406 251 SQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS 300
:|||||||||||||||||||||||||||||||||||||||||||||||||
BL01608___ykp 251 AQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS 300
BSNT_02406 301 SRRYPYVNFTPEREIGNDVLRVEGLTKTIDGVKVLDNVSFIMNREDKIAF 350
||:||||:|.||||||||||.|:.|:||||||||||:|||:||:||||||
BL01608___ykp 301 SRKYPYVHFAPEREIGNDVLVVKDLSKTIDGVKVLDSVSFMMNKEDKIAF 350
BSNT_02406 351 TGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDL 400
|||||||.||||||::||||.|||:||||||||||:||||||||||.|||
BL01608___ykp 351 TGRNELAATTLFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDL 400
BSNT_02406 401 NLVDWLRQYSPHDQSESFLRGFLDACCSLEKKSTKKQMYFPGE---KRSA 447
||||||||:||||||||||||||. :|.|.|| |:::
BL01608___ykp 401 NLVDWLRQFSPHDQSESFLRGFLG------------RMLFSGEEVLKKAS 438
BSNT_02406 448 VCC---RKRCFLAPIF---------------------------------- 460
|.. :.||.|:.:.
BL01608___ykp 439 VLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNNGLISFKGA 488
BSNT_02406 460 -------------------------------------------------- 460
BL01608___ykp 489 MLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELY 538
BSNT_02406 460 - 460
BL01608___ykp 539 A 539
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