Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02406 and BL01608

See DNA alignment / Visit BSNT_02406 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02406.1.5803.seq
#    -bsequence pep-align/BL01608___ykpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02406-BL01608___ykpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02406-BL01608___ykpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02406
# 2: BL01608___ykpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 551
# Identity:     401/551 (72.8%)
# Similarity:   429/551 (77.9%)
# Gaps:         103/551 (18.7%)
# Score: 2062.5
# 
#
#=======================================

BSNT_02406         1 MIAVNNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGE     50
                     ||||.||||||||:||||||||||.||||||||||||||||||||:||||
BL01608___ykp      1 MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGE     50

BSNT_02406        51 IEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKD    100
                     ||||||:|||||||||||||||||||||:||||||||||:||||||||||
BL01608___ykp     51 IEPQTGEVHMSPGERLAVLKQNHFEYEEHEVLKVVIMGHRRLYEVMQEKD    100

BSNT_02406       101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHT    150
                     ||||||||||||||||||||||||||||||||.|||||||||||.|:|||
BL01608___ykp    101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAEGEAAILLKGLGIPEELHT    150

BSNT_02406       151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN    200
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
BL01608___ykp    151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDIQAIQWLEEFLIN    200

BSNT_02406       201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKL    250
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BL01608___ykp    201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKM    250

BSNT_02406       251 SQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS    300
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BL01608___ykp    251 AQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS    300

BSNT_02406       301 SRRYPYVNFTPEREIGNDVLRVEGLTKTIDGVKVLDNVSFIMNREDKIAF    350
                     ||:||||:|.||||||||||.|:.|:||||||||||:|||:||:||||||
BL01608___ykp    301 SRKYPYVHFAPEREIGNDVLVVKDLSKTIDGVKVLDSVSFMMNKEDKIAF    350

BSNT_02406       351 TGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDL    400
                     |||||||.||||||::||||.|||:||||||||||:||||||||||.|||
BL01608___ykp    351 TGRNELAATTLFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDL    400

BSNT_02406       401 NLVDWLRQYSPHDQSESFLRGFLDACCSLEKKSTKKQMYFPGE---KRSA    447
                     ||||||||:||||||||||||||.            :|.|.||   |:::
BL01608___ykp    401 NLVDWLRQFSPHDQSESFLRGFLG------------RMLFSGEEVLKKAS    438

BSNT_02406       448 VCC---RKRCFLAPIF----------------------------------    460
                     |..   :.||.|:.:.                                  
BL01608___ykp    439 VLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNNGLISFKGA    488

BSNT_02406       460 --------------------------------------------------    460
                                                                       
BL01608___ykp    489 MLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELY    538

BSNT_02406       460 -    460
                      
BL01608___ykp    539 A    539


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.