Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02397 and BL01601
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02397___yknX.1.5803.seq
# -bsequence pep-align/BL01601___yknX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02397___yknX-BL01601___yknX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02397___yknX-BL01601___yknX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02397___yknX
# 2: BL01601___yknX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 218/379 (57.5%)
# Similarity: 288/379 (76.0%)
# Gaps: 3/379 ( 0.8%)
# Score: 1113.0
#
#
#=======================================
BSNT_02397___ 1 MKKVWIGIGIAVIVALFVGINIYRSAAPTSGSAGKEIQTGSVEENEISST 50
|||:||||.|....|||:|:|:||| ..|||.|.:.:||..:||.||||.
BL01601___ykn 1 MKKIWIGIVIVGAAALFIGLNLYRS-VQTSGGAEEAVQTVKLEEKEISSE 49
BSNT_02397___ 51 VMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQLS 100
|||||||:|:||||.::|.:||.:.|||||||||||||..|.|||||::.
BL01601___ykn 50 VMVPGTLQFANEQYEYFEPEKGEIADIKVKEGDKVKKGDVLFTYTNEEIR 99
BSNT_02397___ 101 LEKEQNQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAEKQIESE 150
||||||.|:.:|..||::|::.|:.:|.|||.||:.::|.::|::||:.|
BL01601___ykn 100 LEKEQNALSIQSKDLQLEQVKRKISSLKSKEDELKAELGAEKAKRQIDEE 149
BSNT_02397___ 151 RTELQMQKKTAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQEAA 200
|::|:|::|:.::||||.:||:::|..:.:.|:|||.|:||||:|:::||
BL01601___ykn 150 RSQLEMEEKSLQLELKQADLQKETLEKKSAALQVKSGIDGTVITVDKQAA 199
BSNT_02397___ 201 SKKSDIQEPVIHIGNPKDLVVSGKLSEYDTLKVKKGQKVTLTSDVIQGKT 250
:|:||||:|||||||...|||.|.|||||||||||||.||:||||||.|.
BL01601___ykn 200 AKQSDIQKPVIHIGNEDKLVVKGVLSEYDTLKVKKGQNVTITSDVIQNKE 249
BSNT_02397___ 251 WKGTVSAVGLVPDQQESAAAQGT-EQAVQYPLQVKIKGNLPEGKPGFKFI 299
|:|.||.|||||.::.||...|| |||||||.:|||||..|:.|.||..|
BL01601___ykn 250 WRGRVSQVGLVPKEEASAGVAGTKEQAVQYPFEVKIKGERPKAKSGFNMI 299
BSNT_02397___ 300 MNIETDKRKANTLPSKAVKKEDDQYYVYTVKDGKAKRVNVKIGEVTDDLT 349
:.|:||||....||..|||::.||.||:.|:||||||:|||.||..|.|.
BL01601___ykn 300 LKIQTDKRIVQALPEDAVKQDGDQSYVFAVRDGKAKRINVKTGEKADGLV 349
BSNT_02397___ 350 EIKEGLTQDDQVILNPSDQVTDGMEVKS- 377
||..|||..|.||.||::.:..|.|||.
BL01601___ykn 350 EITGGLTNKDPVIANPAEDMKSGTEVKLQ 378
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