Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02395 and BL01599
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02395___yknV.1.5803.seq
# -bsequence pep-align/BL01599___yknV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02395___yknV-BL01599___yknV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02395___yknV-BL01599___yknV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02395___yknV
# 2: BL01599___yknV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 485/606 (80.0%)
# Similarity: 552/606 (91.1%)
# Gaps: 2/606 ( 0.3%)
# Score: 2533.0
#
#
#=======================================
BSNT_02395___ 1 -MKQAKKQGILERFYYSSDEIIEKPFNWAQMWRLLSYVKPYRKTILPLSF 49
..|||||.::.||:|:||:|||||||||||||||.|:|||||.:|||||
BL01599___ykn 1 MENQAKKQTLMNRFFYTSDQIIEKPFNWAQMWRLLKYLKPYRKNLLPLSF 50
BSNT_02395___ 50 LTVLIGTAVKLVIPILIGVYVLDQAITGRNSELLIQLIFIISGLYVLNYA 99
|||:|..|::|.:|||||||.|||||.||:..||:.||.:|||||::||.
BL01599___ykn 51 LTVMISAAIRLAVPILIGVYALDQAIAGRDMNLLVILISVISGLYLVNYV 100
BSNT_02395___ 100 ANVLRIRWMNQLGQHVIYDLRQHLFTHVQRLSHRFFDQRSAGSILVRIMN 149
:|||||||||:||||||||||||||||||||||||||:||||||||||||
BL01599___ykn 101 SNVLRIRWMNKLGQHVIYDLRQHLFTHVQRLSHRFFDERSAGSILVRIMN 150
BSNT_02395___ 150 DINSLQELFTSGVINLLTDLLLLAGVIIILFTLSPELTIAIMVTLPIMFF 199
|||||||||||||||||.|:|||.|:::|||:||||||||||||||:|||
BL01599___ykn 151 DINSLQELFTSGVINLLMDILLLFGIVVILFSLSPELTIAIMVTLPVMFF 200
BSNT_02395___ 200 ISTSLRKKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAFTQEEENMAYF 249
|||:||:|||||||.||||||||||||||||||||||||||||:|||.||
BL01599___ykn 201 ISTNLRRKIRRSWQKVRLKQSKLNSHLNESIQGIRVTQAFTQEKENMMYF 250
BSNT_02395___ 250 DGVNQENYESWREATRKNAMFRPLVEMTNAIGTAVLIWYGATLIMNETIT 299
:|||.||:|:|||||:|||.||||||||||:|||:|||||::||:|||||
BL01599___ykn 251 EGVNSENFEAWREATKKNATFRPLVEMTNAVGTAILIWYGSSLIINETIT 300
BSNT_02395___ 300 IGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEQPNVKE 349
||||||||||||||||||||||||||||||||||||||||||||:|:|.:
BL01599___ykn 301 IGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEKPSVAD 350
BSNT_02395___ 350 KPNAIHNEKINGEISFEEVEFSYDEKRKALHAVSFSIPAGSTLALVGHTG 399
|.:|:..:::.|.|.||:||||||..|||||::||.|||||:||||||||
BL01599___ykn 351 KEDAVKIKELKGRIEFEQVEFSYDGNRKALHSISFEIPAGSSLALVGHTG 400
BSNT_02395___ 400 SGKTTIANLISRFYDATGGTIKIDGIPIKDLSLASLRSQISIVLQDTFIF 449
|||||||||||||||||||.:|:|||||.|:||:.|||||||||||||||
BL01599___ykn 401 SGKTTIANLISRFYDATGGAVKVDGIPITDISLSDLRSQISIVLQDTFIF 450
BSNT_02395___ 450 SGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSV 499
|||||||||||||||:||||::|::|||||.|||.|..||||||||||:|
BL01599___ykn 451 SGTIMENIRFGRPNAADEEVIEAAKAVGADSFISALPNGYATEVEERGNV 500
BSNT_02395___ 500 LSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGR 549
||||:||||||||||||||.|:||||||||||||||||||.||||||.||
BL01599___ykn 501 LSAGERQLISFARALLADPRILILDEATASIDTETEVKIQAALKTLLHGR 550
BSNT_02395___ 550 TAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIYAGLVKAQY 599
||:|||||||||||||:|:|||||||||||||.:|:.|.|:|..||||||
BL01599___ykn 551 TAIMIAHRLSTIRDADKILVLDHGRKIEEGNHQELIGKRGMYYELVKAQY 600
BSNT_02395___ 600 STAIE- 604
.....
BL01599___ykn 601 QMFQRN 606
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