Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01952 and BL01588

See DNA alignment / Visit BSNT_01952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_01952___thiG.1.5803.seq
#    -bsequence pep-align/BL01588___thiG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01952___thiG-BL01588___thiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01952___thiG-BL01588___thiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01952___thiG
# 2: BL01588___thiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     224/255 (87.8%)
# Similarity:   235/255 (92.2%)
# Gaps:           1/255 ( 0.4%)
# Score: 1103.0
# 
#
#=======================================

BSNT_01952___      1 MLTIGGKPFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFDA     50
                     ||.|..:.|.|||||||||||||:||||||:.|||:||||||||||||:.
BL01588___thi      1 MLKIADRQFSSRLLLGTGKYPSFEIQKEAVSASESEILTFAVRRMNIFEE     50

BSNT_01952___     51 SQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI    100
                     ||||||||||||:||||||||||.|||||||||:||||||||||||||||
BL01588___thi     51 SQPNFLEQLDLSRYTLLPNTAGAKTAEEAVRIAKLAKASGLCDMIKVEVI    100

BSNT_01952___    101 GCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIM    150
                     ||.|||||||||||||||.|||||||||||||||||||||||||||||||
BL01588___thi    101 GCDRSLLPDPVETLKASETLLEEGFIVLPYTSDDVVLARKLEELGVHAIM    150

BSNT_01952___    151 PGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGAD    200
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
BL01588___thi    151 PGASPIGSGQGIINPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGAD    200

BSNT_01952___    201 GVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSPVE    250
                     |||||||||||.|||:||:|||.|||||||.|.|||||.|.||.||||.|
BL01588___thi    201 GVLLNTAVSGAKDPVQMAKAMKFAVEAGRLGYLAGRIPEKNYGIASSPEE    250

BSNT_01952___    251 G-LPV    254
                     | |.:
BL01588___thi    251 GKLTI    255


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