Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01956 and BL01586

See DNA alignment / Visit BSNT_01956 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_01956___yjbV.1.5803.seq
#    -bsequence pep-align/BL01586___yjbV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01956___yjbV-BL01586___yjbV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01956___yjbV-BL01586___yjbV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01956___yjbV
# 2: BL01586___yjbV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     188/273 (68.9%)
# Similarity:   222/273 (81.3%)
# Gaps:           3/273 ( 1.1%)
# Score: 962.0
# 
#
#=======================================

BSNT_01956___      1 MSIYKALTIAGSDSGGGAGIQADIKTFQELDVFGMSAITAVTAQNTLGVH     50
                     ||||||||||||||||||||||||||||||.||||:.:||||||||.|||
BL01586___yjb      1 MSIYKALTIAGSDSGGGAGIQADIKTFQELGVFGMTVLTAVTAQNTTGVH     50

BSNT_01956___     51 GVHPLTVEALRQQIDAVAEDLRPDAVKTGMLWNADMIEEVARKIDEYGFN    100
                     ||:||:.|||..|||||||||:||||||||||:|:|||..|.||..|...
BL01586___yjb     51 GVYPLSPEALGAQIDAVAEDLKPDAVKTGMLWSAEMIEVTAEKIAAYELK    100

BSNT_01956___    101 RVIVDPVMIAKGGASLLRDESVATLKELLIPRSYAITPNVPEAETLTGMT    150
                     |||||||||||||||||.:|:|.|||..|:|.:||:|||:||||.|||.:
BL01586___yjb    101 RVIVDPVMIAKGGASLLNEEAVETLKRRLLPLAYAVTPNIPEAEVLTGRS    150

BSNT_01956___    151 ISSLDDRKKAAEQLVKMGAQHVIIKGGHQPEDNHITDLLFDGSMFMQITH    200
                     |.:::||||||..|.:||.:::||||||||||..:|||||||..|.:.|:
BL01586___yjb    151 IQTMEDRKKAARDLHEMGVRNIIIKGGHQPEDGKVTDLLFDGETFTEKTN    200

BSNT_01956___    201 PYINTKHTHGTGCTFAAALTAQTAKGDSIHQAFEVAANFVREAVENTLGI    250
                     .||.||:|||||||||||||||:|||:.|..||.:|..||.|||.::|..
BL01586___yjb    201 SYIKTKNTHGTGCTFAAALTAQSAKGNGIQGAFRIAEAFVHEAVVHSLDF    250

BSNT_01956___    251 GSGHGPTNHFAFKRNSLNTSR--    271
                     |:|||||||||:::.| |...  
BL01586___yjb    251 GAGHGPTNHFAYQKLS-NAGLEL    272


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