Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03706 and BL01578

See DNA alignment / Visit BSNT_03706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_03706___yqgT.1.5803.seq
#    -bsequence pep-align/BL01578___yqgT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03706___yqgT-BL01578___yqgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03706___yqgT-BL01578___yqgT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03706___yqgT
# 2: BL01578___yqgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     226/378 (59.8%)
# Similarity:   277/378 (73.3%)
# Gaps:           7/378 ( 1.9%)
# Score: 1189.0
# 
#
#=======================================

BSNT_03706___      1 MAFITVKPEIKNNLANVAKELKIDEELLKSANRSAQKHQLYCPGYVIEEH     50
                     ||||.:|||:|.|:..::..|.|.|.||.|||.:....:||.||  :..|
BL01578___yqg      1 MAFINIKPELKQNMERLSDILNIPEPLLISANANVSADELYFPG--VSFH     48

BSNT_03706___     51 SGKELQTIQDIKRF-LQPRQLKLSD-SWIEQEKIYDDSAVEKEIKKIIDV     98
                     :||.:|..:..::. |...|....| .|:.:..:||.:.::|||.::.:.
BL01578___yqg     49 AGKNVQAAETYEQLQLLANQYTFEDEQWLTKTAVYDSAELKKEIGRLTEC     98

BSNT_03706___     99 FPFVSCREIGRSVLGRPIWELKAGGEHAVKKVHMNASFHANEWITTSVLL    148
                     ||||:.|.||||.:|:||:||..|.|:|.|:.|||||||||||||||||:
BL01578___yqg     99 FPFVTSRIIGRSSMGQPIYELLLGAENAGKRTHMNASFHANEWITTSVLM    148

BSNT_03706___    149 KWLKEYCMSLCCNSPFFGFSPIKLFNSTSLSLVPLVNPDGVDLVLNGSEV    198
                     |||||||..||......||||:.:|:||.||:||:||||||||||||...
BL01578___yqg    149 KWLKEYCYHLCTGQTALGFSPLDIFSSTKLSVVPIVNPDGVDLVLNGPGH    198

BSNT_03706___    199 MGARRDELERLNEHRPNFNEWKANINGVDLNKQFPSLWEIEKYRK-PTAP    247
                     :|..|:.|:.:|||:|:|.||||||||||||.||||.|||||.|| |.:|
BL01578___yqg    199 LGIAREALDEMNEHQPDFREWKANINGVDLNNQFPSFWEIEKQRKPPKSP    248

BSNT_03706___    248 SYRDFPGISPLTEPESIAMYRLITENPPDRLLALHTQGEEIYWGYKGLEP    297
                     ||||:||..||||||:.||..||...|||||:||||||||||||||||||
BL01578___yqg    249 SYRDYPGDEPLTEPEAAAMRDLIANEPPDRLVALHTQGEEIYWGYKGLEP    298

BSNT_03706___    298 EESAAVIKDFEELSGNIYKGVRDIDSYAGFRDWFIHHYFKEGYTVELGKG    347
                     .|||.||:.||.|||  |||||.|||||||||||||:|.:||||||||||
BL01578___yqg    299 PESADVIQTFERLSG--YKGVRYIDSYAGFRDWFIHYYGREGYTVELGKG    346

BSNT_03706___    348 QNPLPFQQFSHIYNATNGILWRALFFHE    375
                     :||||.:||..||..:.||||.:.||..
BL01578___yqg    347 KNPLPLKQFDDIYCKSRGILWASCFFES    374


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