Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03695 and BL01573

See DNA alignment / Visit BSNT_03695 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_03695___yqhA.1.5803.seq
#    -bsequence pep-align/BL01573___yqhA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03695___yqhA-BL01573___yqhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03695___yqhA-BL01573___yqhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03695___yqhA
# 2: BL01573___yqhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     139/293 (47.4%)
# Similarity:   196/293 (66.9%)
# Gaps:          29/293 ( 9.9%)
# Score: 676.0
# 
#
#=======================================

BSNT_03695___      1 ----MIALDQHLTEHKEDITQQWLEVCTSKGSWLYSAKDQQKLEQKLKDQ     46
                         ..||.::|.:..:.||.:||.         .:|.:::|..|:.|| 
BL01573___yqh      1 MENKHAALYEYLVKQADRITDEWLS---------RTASEKEKTAQQYKD-     40

BSNT_03695___     47 HELLVTIVAKSLRKEDVEDELNRWSLQCAR----DRAVHEVTVTQSVGHF     92
                        .:..|:|...|::.....|:.| .||:    ||||.::.||:|:..|
BL01573___yqh     41 ---FILAVSKVFAKDEQALCWNKAS-GCAKEIAYDRAVSQIPVTESINGF     86

BSNT_03695___     93 NTFRHIMFEWIQKFSEASSQDISIQEFYEWSRILNQNIDEIIEVFTEEYH    142
                     ...|.::.:.|::||:..:.|.|.::|:.|::.|:..:||:||.|..||.
BL01573___yqh     87 KVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQLHLMMDEVIEQFILEYE    136

BSNT_03695___    143 QVTMIQLNAQKEMINELSAPIMPITDGIGILPLVGEIDTHRARTILESVL    192
                     ..|..||.||.|||.|||||::|:::.||:|||:||||||||..|:||.|
BL01573___yqh    137 HTTKSQLKAQTEMIRELSAPVIPVSEHIGVLPLIGEIDTHRATVIIESAL    186

BSNT_03695___    193 EQCSALKLSYLFLDISGVPIVDTMVAYQIFKVIDSTKLLGIETIISGIRP    242
                     .||:.|.||:||:||||||:||||||:|:|||:|||||||:||::||:||
BL01573___yqh    187 TQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRP    236

BSNT_03695___    243 EIAQTVVKLGLDFSNVKTEQSLAKALANKGFKIKEC-------    278
                     ||||||||||:|||::||||||||||.||||.|.|.       
BL01573___yqh    237 EIAQTVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV    279


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