Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03688 and BL01572

See DNA alignment / Visit BSNT_03688 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03688___comGA.1.5803.seq
#    -bsequence pep-align/BL01572___comGA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03688___comGA-BL01572___comGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03688___comGA-BL01572___comGA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03688___comGA
# 2: BL01572___comGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity:     237/356 (66.6%)
# Similarity:   295/356 (82.9%)
# Gaps:           2/356 ( 0.6%)
# Score: 1259.0
# 
#
#=======================================

BSNT_03688___      1 MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKK     50
                     |.:||.:|..||:|||..|||||||||.|::|::.||:|..|.:|..:.:
BL01572___com      1 MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDGLTR     50

BSNT_03688___     51 EECVRLISHFKFLSAMDIGERRKPQNGSLTLKLKEGNVHLRMSTLPTINE    100
                     .||.||||||||||:|||||||.||:|:|||.:....|||||||||||::
BL01572___com     51 NECSRLISHFKFLSSMDIGERRLPQSGALTLYINREPVHLRMSTLPTIHD    100

BSNT_03688___    101 ESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGK    150
                     ||||||::|:.:...:.||||||.....||||||||||:::|||||||||
BL01572___com    101 ESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLMLFTGPTGSGK    150

BSNT_03688___    151 TTTLYSLVQYAKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGL    200
                     |||||||:.|||:||.|||:|||||||:|.|::||||||||||:||||||
BL01572___com    151 TTTLYSLIDYAKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGL    200

BSNT_03688___    201 KAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYR    250
                     ||:|||||||||||||||||||:||||||:||||||:|:|.::|||||||
BL01572___com    201 KAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMHAKNAKGAIYR    250

BSNT_03688___    251 LLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRAS    300
                     |||.|::|.|||||::|::||||||:.||||.:.| ::|||.||..||||
BL01572___com    251 LLELGVDMTEIEQTLVAVSAQRLVDIVCPFCGDSC-TLYCRLSRPVRRAS    299

BSNT_03688___    301 VYELLYGKNLQQCIQEAKGNHANYQYQTLRQIIRKGIALGYLTTNNYDRW    350
                     |:||||||:|..||:||||.....:..||:.:||||||||||.:..|:||
BL01572___com    300 VFELLYGKSLNLCIEEAKGRCGGIKTDTLKMLIRKGIALGYLPSKTYERW    349

BSNT_03688___    351 VYHEKD    356
                     :.||. 
BL01572___com    350 IGHED-    354


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