Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03688 and BL01572
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_03688___comGA.1.5803.seq
# -bsequence pep-align/BL01572___comGA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03688___comGA-BL01572___comGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03688___comGA-BL01572___comGA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03688___comGA
# 2: BL01572___comGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 237/356 (66.6%)
# Similarity: 295/356 (82.9%)
# Gaps: 2/356 ( 0.6%)
# Score: 1259.0
#
#
#=======================================
BSNT_03688___ 1 MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKK 50
|.:||.:|..||:|||..|||||||||.|::|::.||:|..|.:|..:.:
BL01572___com 1 MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDGLTR 50
BSNT_03688___ 51 EECVRLISHFKFLSAMDIGERRKPQNGSLTLKLKEGNVHLRMSTLPTINE 100
.||.||||||||||:|||||||.||:|:|||.:....|||||||||||::
BL01572___com 51 NECSRLISHFKFLSSMDIGERRLPQSGALTLYINREPVHLRMSTLPTIHD 100
BSNT_03688___ 101 ESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGK 150
||||||::|:.:...:.||||||.....||||||||||:::|||||||||
BL01572___com 101 ESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLMLFTGPTGSGK 150
BSNT_03688___ 151 TTTLYSLVQYAKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGL 200
|||||||:.|||:||.|||:|||||||:|.|::||||||||||:||||||
BL01572___com 151 TTTLYSLIDYAKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGL 200
BSNT_03688___ 201 KAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYR 250
||:|||||||||||||||||||:||||||:||||||:|:|.::|||||||
BL01572___com 201 KAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMHAKNAKGAIYR 250
BSNT_03688___ 251 LLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRAS 300
|||.|::|.|||||::|::||||||:.||||.:.| ::|||.||..||||
BL01572___com 251 LLELGVDMTEIEQTLVAVSAQRLVDIVCPFCGDSC-TLYCRLSRPVRRAS 299
BSNT_03688___ 301 VYELLYGKNLQQCIQEAKGNHANYQYQTLRQIIRKGIALGYLTTNNYDRW 350
|:||||||:|..||:||||.....:..||:.:||||||||||.:..|:||
BL01572___com 300 VFELLYGKSLNLCIEEAKGRCGGIKTDTLKMLIRKGIALGYLPSKTYERW 349
BSNT_03688___ 351 VYHEKD 356
:.||.
BL01572___com 350 IGHED- 354
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