Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03688 and BL01572
See
Amino acid alignment /
Visit
BSNT_03688 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03688___comGA.1.5803.seq
# -bsequence dna-align/BL01572___comGA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03688___comGA-BL01572___comGA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03688___comGA-BL01572___comGA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03688___comGA
# 2: BL01572___comGA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1143
# Identity: 726/1143 (63.5%)
# Similarity: 726/1143 (63.5%)
# Gaps: 150/1143 (13.1%)
# Score: 2078.5
#
#
#=======================================
BSNT_03688___ 1 TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCT 50
|||.|..|.||.|||....|||||..||..||.|||||.||.||||||..
BL01572___com 1 TTGTACACGATCGAATCATTAAGCGGAAGATTAATTGACGAGGCATATAG 50
BSNT_03688___ 51 AACAAAGGCTTCTGATATTCACATTGTGCC----------GAGGGAGCGG 90
||..|||||.||.||.|||||.|||||.|| ||||..|.||
BL01572___com 51 AATGAAGGCGTCAGACATTCATATTGTTCCCGGTGAAAAAGAGGCGGTGG 100
BSNT_03688___ 91 GACGCTATC---ATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAG 137
.||||| || |||.|| |.|||.| || || |.|||||.|.
BL01572___com 101 TACGCT-TCAGGATTGAT------GACGAAC-TG--TT--TCAAAAAGAC 138
BSNT_03688___ 138 GGA--CATGAAAAAAGAAGAGTGCGTAAGGCTGATTTCACATTTTAAATT 185
||| .|.||.|| |.||||||...||.||.|||||.||.||||||||
BL01572___com 139 GGATTAACGAGAA---ATGAGTGCTCTAGACTCATTTCTCACTTTAAATT 185
BSNT_03688___ 186 TCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGC 235
||||||..|.|||||.||.||.||.||.||...||||||||.||| .||
BL01572___com 186 TCTTTCTTCGATGGACATTGGCGAGAGACGGCTGCCGCAAAGCGG--GGC 233
BSNT_03688___ 236 TT----ACGTTAAAGCTGAAAGAGGGA-AATGTTCATTTAAGAATGTCAA 280
|| .|.|||.|.| ||..|.|| ...|||||||||||.|||||.|
BL01572___com 234 TTTAACTCTTTATATC---AACCGTGAGCCCGTTCATTTAAGGATGTCCA 280
BSNT_03688___ 281 CGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGTGATGC--CCC 328
|.||||||||.||..||||.||||||.|.||.||||| |.|.| |||
BL01572___com 281 CTCTGCCCACCATCCATGATGAAAGCTTGGTCATCAG---GCTTCTTCCC 327
BSNT_03688___ 329 AATA-------CAATATCCCTTCGATTGATAAA-TTGTCGCTATTTCCGA 370
||.| || |.||..|| |.||| .|.||..|.||.||||
BL01572___com 328 AAGATGAGCAGCA--AGCCGCTC-----ACAAAGCTCTCATTGTTCCCGA 370
BSNT_03688___ 371 AGACAGGAGCCACAT------TACTCTCGTTTTTAAAACATTCCCATGG- 413
|.||.|||| |.||.||.|||.|.||.||||||||.||
BL01572___com 371 ------GTGCAACATTCAAGCTGCTGTCTTTTCTGAAGCATTCCCACGGA 414
BSNT_03688___ 414 --CATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACT 461
.|||| ||||.|||||.||.||.||.||.||.||.||.||.|||||
BL01572___com 415 TTAATGC---TTTTCACCGGCCCGACAGGCTCGGGAAAAACGACAACACT 461
BSNT_03688___ 462 ATACTCTCTCGTTCAATATGCAAAAAAACACTTTAATCGAAATATTGTCA 511
.||.|||.|..||.|.||.||.||....||.|||||.||||||||..|.|
BL01572___com 462 CTATTCTTTAATTGACTACGCCAAGCGGCATTTTAAGCGAAATATCATTA 511
BSNT_03688___ 512 CATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCAG 561
|.||.||.|||||.||.|||.||||...||||.|..||.|.||.||.||.
BL01572___com 512 CGTTGGAAGACCCGGTCGAATCAAGAAGCGAAAACATTTTGCAAGTACAA 561
BSNT_03688___ 562 GTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTT 611
|||||.||||||||.||..|.||||||||.||.||..||||.||..|..|
BL01572___com 562 GTGAACGAAAAAGCGGGCATGACTTATTCTGCGGGGTTGAAGGCGGTGCT 611
BSNT_03688___ 612 GCGCCATGACCCCGATATGATTATTTTAGGTGAGATCAGAGACGCGGAAA 661
||||||.||.||.||.|||||.||..||||.||.||..|.||.||.||||
BL01572___com 612 GCGCCACGATCCGGACATGATCATCCTAGGGGAAATTCGCGATGCCGAAA 661
BSNT_03688___ 662 CAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACG 711
||||..||||.||.||..|||||||..||||||||||.||.||.|||.||
BL01572___com 662 CAGCCCAAATCGCAGTCAGGGCAGCTTTGACGGGACACCTTGTTCTATCG 711
BSNT_03688___ 712 AGCCTTCATACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATT 761
|||.|.|||.|||.|.|.||.||.||.||.||.|||||.|||||.||..|
BL01572___com 712 AGCATGCATGCGAAAAATGCTAAAGGTGCGATATACAGGCTGCTCGAGCT 761
BSNT_03688___ 762 CGGTATCAATATGAATGAAATTGAACAGACTGTCATT----GCAAT-AGC 806
|||..|..||||||..|||||||||||.| |||| |||.| |||
BL01572___com 762 CGGCGTTGATATGACAGAAATTGAACAAA----CATTGGTCGCAGTCAGC 807
BSNT_03688___ 807 GGCTCAGCG-CTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGT 855
||.||||| ||| ||.|||.|.|..||.||||||||.|...||.|.||.
BL01572___com 808 -GCCCAGCGTCTT-GTCGATATCGTCTGTCCGTTTTGCGGCGACAGCTGC 855
BSNT_03688___ 856 TCATCAGTGT-------ATTGTCG---CCAGTCACGAAATACCAGGAGAG 895
.|.| ||| ||||||| ||||| .||.||||
BL01572___com 856 ACTT---TGTATTGCAGATTGTCGAGACCAGT----------TAGAAGAG 892
BSNT_03688___ 896 CTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAG 945
|.|||||.|.|||.|||.|.|||||.||||..|||.|.|..||.|||.|.
BL01572___com 893 CAAGCGTCTTTGAACTTTTGTACGGAAAAAGCCTTAATCTCTGCATCGAA 942
BSNT_03688___ 946 GAGGCAAAAGG-AAAT-------CATGCAAATTACCAATATCAAACGCTT 987
||.|||||||| |.|| |||..||| ||.||.|
BL01572___com 943 GAAGCAAAAGGCAGATGCGGTGGCATCAAAA----------CAGACAC-- 980
BSNT_03688___ 988 CGTCAAA----TTATCAGGAAAGGAATTGCGCTCGGCTATTTAACGACAA 1033
|.|.||| |.|||.|.||.|||||.||.|||||.|||.|..||.|.|
BL01572___com 981 CTTAAAAATGCTGATCCGCAAGGGAATAGCACTCGGATATCTGCCGTCGA 1030
BSNT_03688___ 1034 ACAAC-TATGACCGGTGGGTTTAT----CATGAAAAAGATTAG 1071
| ||| |||||.||.||| || |||| |||||||.
BL01572___com 1031 A-AACTTATGAACGCTGG----ATAGGCCATG---AAGATTAA 1065
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.