Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03682 and BL01569

See DNA alignment / Visit BSNT_03682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03682___comGD.1.5803.seq
#    -bsequence pep-align/BL01569___comGD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03682___comGD-BL01569___comGD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03682___comGD-BL01569___comGD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03682___comGD
# 2: BL01569___comGD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      53/155 (34.2%)
# Similarity:    78/155 (50.3%)
# Gaps:          30/155 (19.4%)
# Score: 228.5
# 
#
#=======================================

BSNT_03682___      1 MNIKLNEEKGFTLLESLLVLSLASILLIAVFTTLPPAYDNTAVRQAARQL     50
                                  :|||.||.:.||:...:|..|||.|:...|:....||
BL01569___com      1 -------------MESLTVLMIGSIMFSLLFALLPPIYEKRIVQHFVSQL     37

BSNT_03682___     51 KNDIMLTQQTAISRQQRTKILF----------HKKEYQLVIGDT-VIERP     89
                     :.|::..||||:.|....|:.|          |..|     |.: .:.|.
BL01569___com     38 EEDLLYAQQTALVRHTTVKVQFDFAGCRYIMKHSDE-----GSSPELVRT     82

BSNT_03682___     90 YATGLSIELLTLKDRLEFNEKGHPNAGGKIRV-KGHAVYDITVYLGSGRV    138
                     |:..::|:..|||..|.||..|.||.||||.: ..||.:.:|:|||||::
BL01569___com     83 YSCNIAIKKSTLKPILTFNPSGVPNQGGKIVIDTQHASFILTIYLGSGKI    132

BSNT_03682___    139 NVERK    143
                     ||::|
BL01569___com    133 NVQKK    137


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