Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03672 and BL01564
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_03672___sipW.1.5803.seq
# -bsequence pep-align/BL01564___sipW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03672___sipW-BL01564___sipW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03672___sipW-BL01564___sipW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03672___sipW
# 2: BL01564___sipW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 120/194 (61.9%)
# Similarity: 154/194 (79.4%)
# Gaps: 4/194 ( 2.1%)
# Score: 624.0
#
#
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BSNT_03672___ 1 ----MKLISNILYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSG 46
||.|||.|||||||:||...:|||||:||||||.:|||.||:||||
BL01564___sip 1 MKHVMKWISNFLYVIIFTIIIAAVIVVISTKSSGGEPQLFGYQLKTVLSG 50
BSNT_03672___ 47 SMEPEFNTGSLILVKEIADVKELQKGDVITFMQDANTAVTHRIVDITKQG 96
||||||.|||:|.|:::.:...|:|||:||||||.||.|||||:.|||..
BL01564___sip 51 SMEPEFKTGSVIAVQKVENPGSLKKGDIITFMQDENTMVTHRIIGITKNK 100
BSNT_03672___ 97 DHLLFKTKGDNNAAADSAPVSDENVRAQYTGFQLPYAGYMLHFASQPIGT 146
.:|:||||||||...||.||..|||.|:|:|..:|||||:|.|||:||||
BL01564___sip 101 SNLMFKTKGDNNQNPDSDPVLAENVVAKYSGITVPYAGYLLDFASKPIGT 150
BSNT_03672___ 147 AVLLIVPGVMLLVYAFVTISSAIREIERKTKALETDTKDSTMST 190
|:||||||::|::||.:|:|:|:|||::|.||:|...||.::|.
BL01564___sip 151 AILLIVPGLLLILYAVITVSAALREIDQKAKAIEAAGKDQSVSM 194
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