Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00529 and BL01558

See DNA alignment / Visit BSNT_00529 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00529___opuAB.1.5803.seq
#    -bsequence pep-align/BL01558___opuAB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00529___opuAB-BL01558___opuAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00529___opuAB-BL01558___opuAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00529___opuAB
# 2: BL01558___opuAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     228/285 (80.0%)
# Similarity:   261/285 (91.6%)
# Gaps:           4/285 ( 1.4%)
# Score: 1181.0
# 
#
#=======================================

BSNT_00529___      1 ---MDRLPRIPLADIIDRFVDWITMTFGGFFDGIANGLAAFVNGIVTGLG     47
                        :..||||||||.||:||||:|::|||.|:|||:|:.:||:.||.|||
BL01558___opu      1 MFTLSSLPRIPLADWIDQFVDWLTVSFGGVFNGIASGVESFVDEIVQGLG     50

BSNT_00529___     48 FIPSILLTIIFAALAWWISTRGIALFTLIGFLLIDYLGYWDPMLQTLALV     97
                     |:|.::||:|||||.|.||.|||||||||||.:||||||||.||||||||
BL01558___opu     51 FVPPVMLTVIFAALVWLISKRGIALFTLIGFFIIDYLGYWDAMLQTLALV    100

BSNT_00529___     98 LTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFF    147
                     :|||:||:::|:|:|||.|||:||||:|||||||||||||||||||||||
BL01558___opu    101 VTSVLISVIIGIPVGIWGSQKKTVRRVVTPILDLMQTMPAFVYLLPAIFF    150

BSNT_00529___    148 FNIGVVPGVVASVIFAMPPTIRMTVLGIKQVPADLIEATEAFGSTTAQRL    197
                     ||||||||||||||||||||||||:|||:|||.|||||||||||||:|||
BL01558___opu    151 FNIGVVPGVVASVIFAMPPTIRMTILGIQQVPEDLIEATEAFGSTTSQRL    200

BSNT_00529___    198 FKVQLPLATKTILAGINQSIMLALSMVVIAAMVGAPGLGSEVYSAVTQLK    247
                     ||||||||||||||||||||||||||||||:||||||||.|||.|||||:
BL01558___opu    201 FKVQLPLATKTILAGINQSIMLALSMVVIASMVGAPGLGEEVYRAVTQLQ    250

BSNT_00529___    248 TGVGVEAGIAIVIVAITLDRITQNIKVKKKSRGNA    282
                     ||.|||.|:||||:||.|||:|||||: |||||||
BL01558___opu    251 TGTGVETGLAIVIIAIVLDRVTQNIKL-KKSRGNA    284


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