Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03660 and BL01548

See DNA alignment / Visit BSNT_03660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence pep-align/BSNT_03660___yqhM.1.5803.seq
#    -bsequence pep-align/BL01548___yqhM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03660___yqhM-BL01548___yqhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03660___yqhM-BL01548___yqhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03660___yqhM
# 2: BL01548___yqhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     235/278 (84.5%)
# Similarity:   257/278 (92.4%)
# Gaps:           0/278 ( 0.0%)
# Score: 1256.0
# 
#
#=======================================

BSNT_03660___      1 MQKETWRFIDSGNASPAFNMALDEALLYWHSEKKIPPVIRFYGWNPATLS     50
                     |:||||||||||...||||||||||||:||||.||||.||||||||.|||
BL01548___yqh      1 MEKETWRFIDSGRRDPAFNMALDEALLFWHSENKIPPTIRFYGWNPPTLS     50

BSNT_03660___     51 VGYFQNIKKEINFEAVHKYNLGFVRRPTGGRGVLHDQELTYSVIVSEEHP    100
                     |||||||:||||.:||.|:.||||||||||||||||||||||||||||||
BL01548___yqh     51 VGYFQNIEKEINLDAVKKHGLGFVRRPTGGRGVLHDQELTYSVIVSEEHP    100

BSNT_03660___    101 EMPATVTEAYRVISEGILQGFRNLGLDAYFAIPRTEKEKESLKNPRSSVC    150
                     |||.||||||||||||||:|||.|.||||||||||||||:||||||||||
BL01548___yqh    101 EMPKTVTEAYRVISEGILEGFRELELDAYFAIPRTEKEKQSLKNPRSSVC    150

BSNT_03660___    151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILLDLDEDKLFDLFLYP    200
                     |||||||||||||||||||||||||||||||||||||||||||||||:|.
BL01548___yqh    151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILLDLDEDKLFDLFIYK    200

BSNT_03660___    201 SERVRERMQRNFKNKAVAINELTEKRVTMDEARKAFKEGFETGLNIHLEP    250
                     ::|:|||||||||.|||||||||:::||::||.:|||:|||.||||||||
BL01548___yqh    201 NDRLRERMQRNFKQKAVAINELTKEKVTIEEASEAFKKGFEKGLNIHLEP    250

BSNT_03660___    251 YELSQEELGFVHHLAETKYASDEWNYKR    278
                     |||::||..||..||.||||:|||||:|
BL01548___yqh    251 YELTEEETEFVEDLARTKYATDEWNYRR    278


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.