Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03643 and BL01536
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_03643___spoIIIAE.1.5803.seq
# -bsequence pep-align/BL01536___spoIIIAE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03643___spoIIIAE-BL01536___spoIIIAE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03643___spoIIIAE-BL01536___spoIIIAE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03643___spoIIIAE
# 2: BL01536___spoIIIAE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 325/401 (81.0%)
# Similarity: 359/401 (89.5%)
# Gaps: 2/401 ( 0.5%)
# Score: 1593.5
#
#
#=======================================
BSNT_03643___ 1 MKRFQWVLLLAVLIIAGRAEIVQAAGNAEQTEDHA--ETAEQLAERTAAS 48
||||.:.||:..::..|...:..:...||...:.| |:||.:|...|..
BL01536___spo 1 MKRFLFWLLVIGIVCFGAHNVQASPKEAEPAGETAAEESAEAIAREQAEG 50
BSNT_03643___ 49 LETDKIGEFWNDIMTEYGGLLPESQKGSLMEFINGDKSFSPQEWLKALFS 98
||.|::|||||:|:|||||.|||||||||:||:.|:|.|||:||.|||||
BL01536___spo 51 LELDRVGEFWNNILTEYGGHLPESQKGSLLEFVKGEKHFSPEEWGKALFS 100
BSNT_03643___ 99 YLFHEVLANGKLLGTLILLTIFCVILQLLQNAFQQSTVSKVAYSIVYMVL 148
||||||||||||||||||||||||:||||||||||||||||||:||||||
BL01536___spo 101 YLFHEVLANGKLLGTLILLTIFCVLLQLLQNAFQQSTVSKVAYAIVYMVL 150
BSNT_03643___ 149 IILALNSFHVAINYATEAIQTMTSFILALIPLLLALLASSGGAVSAAFFH 198
||||||||.||:.||.|||||||||||:|:||||||:|:||||.||||||
BL01536___spo 151 IILALNSFRVAVTYANEAIQTMTSFILSLVPLLLALMATSGGAASAAFFH 200
BSNT_03643___ 199 PVILFLMNTSGLLIQNIVMPLIFLSAILSIVSTMTEQYKVTQLANLLRNI 248
||||||||||||.||.||:||:|||||||||||||:||||||||.||||.
BL01536___spo 201 PVILFLMNTSGLFIQYIVLPLLFLSAILSIVSTMTDQYKVTQLAQLLRNA 250
BSNT_03643___ 249 AIGALAVFLTIFLGVISVQGASAAVTDGITLRTAKFITGNFIPVLGRMFT 298
|||.||.|||:|||||||||||||||||||||||||||||||||||||||
BL01536___spo 251 AIGTLAAFLTVFLGVISVQGASAAVTDGITLRTAKFITGNFIPVLGRMFT 300
BSNT_03643___ 299 DATDTVISASLLLKNTVGILGVAILICIAAFPAIKVLSLAFIYKLAAAIL 348
:||||||||||||||||||||||||||||||||||:||||.|||:|||:|
BL01536___spo 301 EATDTVISASLLLKNTVGILGVAILICIAAFPAIKILSLALIYKIAAAVL 350
BSNT_03643___ 349 QPLGGGPVITCLDVISKSVIYIFAALAIVSLMFFLSLTVIITAGNLTMMM 398
|||||||||:|||||||||||||||:||||||||||||||||||||||||
BL01536___spo 351 QPLGGGPVISCLDVISKSVIYIFAAMAIVSLMFFLSLTVIITAGNLTMMM 400
BSNT_03643___ 399 K 399
|
BL01536___spo 401 K 401
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