Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03617 and BL01522

See DNA alignment / Visit BSNT_03617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_03617.1.5803.seq
#    -bsequence pep-align/BL01522___yqxC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03617-BL01522___yqxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03617-BL01522___yqxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03617
# 2: BL01522___yqxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     190/281 (67.6%)
# Similarity:   212/281 (75.4%)
# Gaps:          39/281 (13.9%)
# Score: 1001.0
# 
#
#=======================================

BSNT_03617         1 ---------------------------------------MDKPGEKIDRD     11
                                                            :||||||:||.
BL01522___yqx      1 MTGKKERLDVLLVERGLMETREKAKRAIMAGIVYTNENRLDKPGEKVDRT     50

BSNT_03617        12 LPLTVKGNPLRYVSRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCA     61
                     :|||||||||:||||||||||||||||.:||:.|:|||||||||||||||
BL01522___yqx     51 IPLTVKGNPLKYVSRGGLKLEKALKEFQLSVQGKLMIDIGSSTGGFTDCA    100

BSNT_03617        62 LQNGAKQSYAVDVGYNQLAWKLRQDERVVVMERTNFRYATPADFTKGMPE    111
                     |||||..|||||||||||||||||||||||||||||||.||||||:|:||
BL01522___yqx    101 LQNGALCSYAVDVGYNQLAWKLRQDERVVVMERTNFRYCTPADFTEGLPE    150

BSNT_03617       112 FATIDVSFISLRLILPVLRTLLVPGSDCMALVKPQFEAGRESVGKKGIVR    161
                     |||:|||||||::|||||:.:|||||||:|||||||||||||||||||||
BL01522___yqx    151 FATVDVSFISLKIILPVLKNILVPGSDCIALVKPQFEAGRESVGKKGIVR    200

BSNT_03617       162 DPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEFLLHLHWPGEG    211
                     ||.||..||..:..|:|.|||.|:..||||||||||||||||||||.||.
BL01522___yqx    201 DPLVHKAVLDDISRFAAREGYDCRNASFSPITGGDGNIEFLLHLHWDGEA    250

BSNT_03617       212 QDGQELPEEEIMRVVEEAHKTLKEKKADVPE    242
                     |.|..:.||.|.::|||||||||.||.|..:
BL01522___yqx    251 QSGTPIAEETINQIVEEAHKTLKAKKPDQRD    281


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.