Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03602 and BL01515

See DNA alignment / Visit BSNT_03602 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence pep-align/BSNT_03602___yqiH.1.5803.seq
#    -bsequence pep-align/BL01515___yqiH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03602___yqiH-BL01515___yqiH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03602___yqiH-BL01515___yqiH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03602___yqiH
# 2: BL01515___yqiH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      44/109 (40.4%)
# Similarity:    67/109 (61.5%)
# Gaps:          14/109 (12.8%)
# Score: 218.0
# 
#
#=======================================

BSNT_03602___      1 -MKQTVLLLFTALFLSGCSVA-----SADDS-----VPRFTEEGKYIGSA     39
                      .|..:|:||..|.|:||...     |.|:|     .....:||.::|.|
BL01515___yqi      1 MRKGVILVLFAMLLLAGCGTTQHNGQSGDESRKGTGEETLVKEGTFVGLA     50

BSNT_03602___     40 DPHTIAVSLNGEETMIQVPKDKRDECESLPDQTHVLVKYTKKDNGTLQLE     89
                     |.||:||:::|:|||.|||.:|||:.:.:.|.|.|.|:|||.::||||||
BL01515___yqi     51 DQHTVAVNIDGKETMFQVPPEKRDKYKGIEDDTKVEVEYTKAEDGTLQLE    100

BSNT_03602___     90 DIQLRKNSS     98
                     |::.::   
BL01515___yqi    101 DMKKKE---    106


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.