Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03654 and BL01512
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence pep-align/BSNT_03654___yqhQ.1.5803.seq
# -bsequence pep-align/BL01512___yqhQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03654___yqhQ-BL01512___yqhQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03654___yqhQ-BL01512___yqhQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03654___yqhQ
# 2: BL01512___yqhQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 246/319 (77.1%)
# Similarity: 272/319 (85.3%)
# Gaps: 3/319 ( 0.9%)
# Score: 1276.5
#
#
#=======================================
BSNT_03654___ 1 MSKHKVPPAYGGQAVVEGVMFGGKHHYVTAIRRTDGSIDFFKLPRKHNPK 50
||.....||||||||||||||||:.||||||||.||||:|||||||.||.
BL01512___yqh 1 MSNQTKQPAYGGQAVVEGVMFGGRRHYVTAIRRKDGSIEFFKLPRKTNPT 50
BSNT_03654___ 51 LNIVKKIPFLRGIAAIIEASANGTKHLNFSSERYGLDPSEDKTLEQEEKK 100
|..:|||||||||.||:|||||||||||||||||.||||.|..|::| |
BL01512___yqh 51 LEKLKKIPFLRGIIAIVEASANGTKHLNFSSERYDLDPSLDDQLKEE--K 98
BSNT_03654___ 101 SSGLSMYLSLAVIGVLSFLFSKFVFTLVPVFLAELTRPIFSSDTAQIAVE 150
.|.|:|...||.:|||||||.||:||||||||||||||:|.||.|||.:|
BL01512___yqh 99 PSNLTMIFGLAAVGVLSFLFGKFIFTLVPVFLAELTRPVFQSDVAQIMIE 148
BSNT_03654___ 151 SLFKLILLLGYIYFLSMTPLIKRVFQYHGAEHKVINCYEQNLPITVENVQ 200
|.|||:|||.|||.:|.||.|||||||||||||||||||||||:||||||
BL01512___yqh 149 SFFKLLLLLSYIYAISCTPFIKRVFQYHGAEHKVINCYEQNLPVTVENVQ 198
BSNT_03654___ 201 NQSRLHYRCGSSFILFTIIVGMFVYLLVPTDPLWLRVIDRVALIPVVLGI 250
.||||||||||||||||:||||||||||||||||:|:::|:|||||||||
BL01512___yqh 199 RQSRLHYRCGSSFILFTVIVGMFVYLLVPTDPLWVRILNRLALIPVVLGI 248
BSNT_03654___ 251 SFEVLQLTNKVRDIPGLKLLGYPGLWLQLLTTKEPKDEQVEVAIESFNEL 300
||||||||||:||||.||.||||||||||||||||.|:||||||.|||||
BL01512___yqh 249 SFEVLQLTNKLRDIPVLKALGYPGLWLQLLTTKEPSDDQVEVAIASFNEL 298
BSNT_03654___ 301 LRLEALSEQNQKPSHNVI- 318
|.:|..:|..||...|::
BL01512___yqh 299 LHMETKAEDEQKEPSNIVM 317
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