Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03654 and BL01512
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03654___yqhQ.1.5803.seq
# -bsequence dna-align/BL01512___yqhQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03654___yqhQ-BL01512___yqhQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03654___yqhQ-BL01512___yqhQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03654___yqhQ
# 2: BL01512___yqhQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 996
# Identity: 697/996 (70.0%)
# Similarity: 697/996 (70.0%)
# Gaps: 81/996 ( 8.1%)
# Score: 2316.0
#
#
#=======================================
BSNT_03654___ 1 ATGTCA----AAACATAAAGTTCCGCCCGCTTACGGCGGGCAGGCTGTTG 46
|||||| |||||.|| |.||||||.|||||.|||||||||||.|
BL01512___yqh 1 ATGTCAAATCAAACAAAA----CAGCCCGCATACGGAGGGCAGGCTGTCG 46
BSNT_03654___ 47 TGGAAGGCGTTATGTTTGGCGGAAAGCATCATTACGTTACAGCCATCAGA 96
|.||||||||.|||||.|||||.|.||..|||||.||.||.||.|||.|.
BL01512___yqh 47 TCGAAGGCGTCATGTTCGGCGGCAGGCGCCATTATGTAACCGCGATCCGC 96
BSNT_03654___ 97 AGAACGGATGGAAGCATTGACTTTTTTAAGCTTCCCCGCAAACACAACCC 146
||||..||.|||||||||||.|||||.|||||.||.||.|||..|||.||
BL01512___yqh 97 AGAAAAGACGGAAGCATTGAATTTTTCAAGCTGCCTCGGAAAACCAATCC 146
BSNT_03654___ 147 GAAACT--GAACATCGTGAAAAAGATCCCGTTTTTACGGGGG---ATCGC 191
||..|| .||.|| |.||.||.||.||.|||.|..|.||| |||||
BL01512___yqh 147 GACGCTTGAAAAAT--TAAAGAAAATTCCTTTTCTCAGAGGGATTATCGC 194
BSNT_03654___ 192 GGCCATTATCGAAGCGAGTGCAAACGGCACAAAGCATCTGAATTTTTCAA 241
| |||.|.||||||||.||.||||||||.|||||..||||||||||.|
BL01512___yqh 195 G---ATTGTTGAAGCGAGCGCTAACGGCACCAAGCACTTGAATTTTTCGA 241
BSNT_03654___ 242 GCGAACGTTACGGGCTCGATCCATCTGAAGACAAGA-CACTTGAGCAGGA 290
|||||||.||.|..|||||.||.|||..|||| || ||.|||| |
BL01512___yqh 242 GCGAACGCTATGACCTCGACCCTTCTTTAGAC--GATCAATTGA-----A 284
BSNT_03654___ 291 AGAAAAAAAATCCTCCGGGCTGTCTATGTA-------TCTCAGCCTCGCA 333
||||.|.||..|.|||...|||.|.||| | |||| || ||||
BL01512___yqh 285 AGAAGAGAAGCCGTCCAATCTGACAATG-ATTTTTGGTCTC-GC--CGCA 330
BSNT_03654___ 334 GTTATAGGCGTCCTATCATTTTTGTTCAGTAAATTCGTATTTACATTGGT 383
| |.||||||||.||.|||||||||.|.||.||..|.|||||..|.||
BL01512___yqh 331 G---TCGGCGTCCTGTCTTTTTTGTTCGGCAAGTTTATTTTTACGCTCGT 377
BSNT_03654___ 384 TCCAGTTTTCTTAGCGGAACTGACAAGGCCGATTTTTTCCTCGGACACGG 433
.||.|||||.||||||||.||.||..|.|||.|.|||...||||||...|
BL01512___yqh 378 GCCCGTTTTTTTAGCGGAGCTCACCCGTCCGGTCTTTCAGTCGGACGTCG 427
BSNT_03654___ 434 CGCAAATCGCGGTTGAAAGCCTGTTTAAGTTGATTTTGCTGCTCGGTTAC 483
||||.||...|.|.||||||.|.||||||.||.|..|.||.||..|.||.
BL01512___yqh 428 CGCAGATTATGATCGAAAGCTTCTTTAAGCTGCTCCTTCTCCTAAGCTAT 477
BSNT_03654___ 484 AT-----CTATTTTTTGTCCATG-ACACCGCTTATTAAAAGAGTGTTTCA 527
|| ||||.| |||| ||.||..|||||||||||||.|||||
BL01512___yqh 478 ATTTACGCTATAT------CATGCACTCCTTTTATTAAAAGAGTTTTTCA 521
BSNT_03654___ 528 ATATCATGGAGCCGAACATAAAGTCATAAACTGTTATGAACAGAATTTGC 577
||||||.|||||.|||||.||.||||||||||||||.||.||.|||.|||
BL01512___yqh 522 ATATCACGGAGCAGAACACAAGGTCATAAACTGTTACGAGCAAAATCTGC 571
BSNT_03654___ 578 CAATTACTGTGGAGAATGTCCAAAACCAATCTCGGCTTCATTACCGCTGC 627
|..|.||.||.||.||.||.||....||.||..|.||.||.|||||.|||
BL01512___yqh 572 CGGTCACGGTTGAAAACGTTCAGCGGCAGTCAAGACTGCACTACCGTTGC 621
BSNT_03654___ 628 GGATCAAGCTTTATTTTATTTACGATTATTGTCGGCATGTTTGTTTATTT 677
|||...|||||||||.||||.||..|.||.||.||||||||||||||.||
BL01512___yqh 622 GGAAGCAGCTTTATTCTATTCACCGTCATCGTGGGCATGTTTGTTTACTT 671
BSNT_03654___ 678 ACTCGTTCCGACAGATCCGCTTTGGCTGCGTGTT----ATAGATCGTGTC 723
.||.|||||.||.||.||.||.|||.|.|||.|| ||||| .||
BL01512___yqh 672 GCTTGTTCCTACTGACCCTCTCTGGGTTCGTATTTTGAATAGA----CTC 717
BSNT_03654___ 724 GCACTGATACCGGTCGTGCTTGGTATATCCTTTGAAGTTCTGCAGCTGAC 773
|||||||||||.|||||.||.||.||.||.||||||||.|||||||||||
BL01512___yqh 718 GCACTGATACCCGTCGTTCTCGGCATTTCATTTGAAGTCCTGCAGCTGAC 767
BSNT_03654___ 774 AAACAAAGTGCGTGACATTCCCGGT-CTGAAATTACTTGGGTACCCGGGA 822
|||||||.||.|.|||| ||||.|| .||||....||.||.||||||||
BL01512___yqh 768 AAACAAACTGAGAGACA-TCCCTGTATTGAAGGCGCTCGGCTACCCGGG- 815
BSNT_03654___ 823 CTT-TGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTG 871
||| |||||.|||||.|||||.||.||.||.||....||.||.|||||.|
BL01512___yqh 816 CTTATGGCTGCAGCTTTTAACAACGAAAGAGCCGTCTGACGATCAGGTGG 865
BSNT_03654___ 872 AAGTTGCCATCGAAAGCTTTAACGAACTTCT-------CAGACTCGAAGC 914
||||.||.||||.||||||.||.||.||||| .|.|| |.||||
BL01512___yqh 866 AAGTGGCAATCGCAAGCTTCAATGAGCTTCTTCATATGGAAAC-CAAAGC 914
BSNT_03654___ 915 ATTGTCTGAGCAAAATCAGAAG---CCTTCTCACAACGTCATCTAA 957
| |||.|..|.|||||| ||||||.|.|.|||.||.|||
BL01512___yqh 915 A------GAGGACGAACAGAAGGAACCTTCTAATATCGTAATGTAA 954
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