Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03573 and BL01511

See DNA alignment / Visit BSNT_03573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence pep-align/BSNT_03573___bmrU.1.5803.seq
#    -bsequence pep-align/BL01511___bmrU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03573___bmrU-BL01511___bmrU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03573___bmrU-BL01511___bmrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03573___bmrU
# 2: BL01511___bmrU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     177/300 (59.0%)
# Similarity:   220/300 (73.3%)
# Gaps:           3/300 ( 1.0%)
# Score: 939.0
# 
#
#=======================================

BSNT_03573___      1 MSHRKALLIHNGNAGNKNIEKALGAVVPVLSHHLDEVIIKQTKKKDDAYH     50
                     |:.:||:||:|||||.||:||.|||.||:||..:||:|:|.|:||.||:.
BL01511___bmr      1 MNRKKAMLIYNGNAGQKNVEKTLGAAVPILSQAIDELIVKPTRKKRDAFE     50

BSNT_03573___     51 FCRSIDDSVDTVFILGGDGTIHQCINAISALERKPAVGILPGGTCNDFSR    100
                     ||..|.:.:..:||||||||:|:|||.||.|:.||.:|||||||||||||
BL01511___bmr     51 FCLEIGEDIGQLFILGGDGTVHECINGISQLQTKPDIGILPGGTCNDFSR    100

BSNT_03573___    101 VLGIPQNLAKAAEALMAGNKTSVDVCQMNDRYFLNFWGIGLIAETSNQIN    150
                     .|.||||:.||||||..|:...|||.:.||.|.|||||||||.|.|:.||
BL01511___bmr    101 ALRIPQNIEKAAEALANGSPVPVDVLKANDHYCLNFWGIGLITEASSHIN    150

BSNT_03573___    151 ETEKALLGKISYFTSALRTVSSAASFPMTLKIDGKEIKEEAVMLLVMNGQ    200
                     :|||||||:||||||||||:|:...|...|.|||:|..:||||::|:||.
BL01511___bmr    151 QTEKALLGRISYFTSALRTISNLEPFSFRLSIDGEEFADEAVMVVVLNGP    200

BSNT_03573___    201 YIGTNRIPLPDASIEDGLLDVLICRNTNLTALRELMSMEQGSIDRFTGEL    250
                     :||||:||||..||.||..|:|:||||||.||:||.:|:....|.|.|||
BL01511___bmr    201 FIGTNKIPLPQLSINDGKADILVCRNTNLAALKELFAMDDPEWDSFKGEL    250

BSNT_03573___    251 SYVQASRIEIETDTAKKADMDGEVYTHTPAVIQVLPQHIDMLVPANG---    297
                     ||.|...:.|||....:||.|||:.|.|||.|:||..|:.||.|...   
BL01511___bmr    251 SYYQGQTVRIETALPMEADTDGEICTKTPASIEVLNGHLRMLTPLEKEKS    300


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