Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01126 and BL01493

See DNA alignment / Visit BSNT_01126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_01126___yerB.1.5803.seq
#    -bsequence pep-align/BL01493___yerB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01126___yerB-BL01493___yerB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01126___yerB-BL01493___yerB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01126___yerB
# 2: BL01493___yerB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     209/333 (62.8%)
# Similarity:   251/333 (75.4%)
# Gaps:           6/333 ( 1.8%)
# Score: 1082.5
# 
#
#=======================================

BSNT_01126___      1 -MKKWMTVCALCFV-FFLLVSCQQKDAVPDNAKKLKAPLTGLKTEQKVTE     48
                      :.:::.| .|||. ..||.|||.::  ....:|...||||||.:..: .
BL01493___yer      1 MVNRYVRV-LLCFASLLLLASCQSQE--QQEKEKNIHPLTGLKADGDI-R     46

BSNT_01126___     49 RRPVAVVVNNHPKARPQSGLSKADIVIEALAEGQITRFLAIFQSQMPETV     98
                     :||:|||||||.||||||||||||||||||:||.|||.|||:||.|||.|
BL01493___yer     47 QRPIAVVVNNHSKARPQSGLSKADIVIEALSEGPITRLLAIYQSDMPEAV     96

BSNT_01126___     99 GPVRSAREYFVTLSNGFDSIFVHHGWSPGAKEQLESGAADYMNGLDFDGS    148
                     ||||||||||:.|:.|||||.||||||||||::|.:|.||::||:|.||:
BL01493___yer     97 GPVRSAREYFIDLALGFDSILVHHGWSPGAKDRLLNGDADHINGMDHDGT    146

BSNT_01126___    149 LFWRADFSKPPHNSYTSYDYIKKAAEQKGYKLKQETNPLLFQTSDAKSAN    198
                     |||||||.:.||||||||..:|:||:.|||.::..|.||.|:.|..|.::
BL01493___yer    147 LFWRADFREAPHNSYTSYKNVKQAADDKGYAIETRTEPLTFKASPDKPSD    196

BSNT_01126___    199 ESYNVRVDYGTKNVTNLVEYNYDKKAESYTRSSDGVITTDRETGKPVAIQ    248
                     ..|::|:|||||:|||.|||.||||.|.|.|.||||:|||.||.:||.:|
BL01493___yer    197 ALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETEEPVVLQ    246

BSNT_01126___    249 NIFIVEASHHIIDQDGRRDIDLESGGKGLLFQDGNVIETDWKQVNGRIVP    298
                     ||.|.||.||:.|..|||||||.|||||||.|:|.|....||..||||:|
BL01493___yer    247 NILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIP    296

BSNT_01126___    299 IKDGKWLPFVPGKTWINIVPDLDAASISKGEGV    331
                     ..|||.:|||||||||||||||...||||||||
BL01493___yer    297 TADGKTVPFVPGKTWINIVPDLSKVSISKGEGV    329


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