Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01124 and BL01492

See DNA alignment / Visit BSNT_01124 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_01124___yerA.1.5803.seq
#    -bsequence pep-align/BL01492___yerA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01124___yerA-BL01492___yerA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01124___yerA-BL01492___yerA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01124___yerA
# 2: BL01492___yerA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     451/580 (77.8%)
# Similarity:   507/580 (87.4%)
# Gaps:           1/580 ( 0.2%)
# Score: 2428.0
# 
#
#=======================================

BSNT_01124___      1 MSERTFNWKNKDIRAQVDVVDSKLLPTLLLRNALVLNPYVKQWLKKNIWI     50
                     |||||..||||.||:|||||.|:|.||||||||.|||||||||:..|:||
BL01492___yer      1 MSERTLIWKNKHIRSQVDVVSSRLQPTLLLRNASVLNPYVKQWIPANVWI     50

BSNT_01124___     51 YQDRIVYVGHELPNRAEEIHTIDCEGKYIVPGYIEPHAHPFQIYNPQTLA    100
                     :.|||||||.:||..|.:. |||||||||||||||||.||||||||||||
BL01492___yer     51 HHDRIVYVGRDLPKTAVKT-TIDCEGKYIVPGYIEPHVHPFQIYNPQTLA     99

BSNT_01124___    101 EYVSQYGTTTFVNDNLFLLLQSGKKKALTILNELKKQPVQYFWWSRYDLQ    150
                     |||||:||||||||||||||..|||||.:||.|||||||.|:||||||||
BL01492___yer    100 EYVSQFGTTTFVNDNLFLLLHCGKKKAFSILEELKKQPVHYYWWSRYDLQ    149

BSNT_01124___    151 TEVLNEDHVLPFDVRKQWIEHPDVIQGGEMTGWPRLVDGDDLMLHCMQAT    200
                     |||||||.:|..|.||.|.|||||||||||||||||:|||||:|||||.|
BL01492___yer    150 TEVLNEDQILSIDYRKHWGEHPDVIQGGEMTGWPRLLDGDDLILHCMQCT    199

BSNT_01124___    201 KKQRKRIEGHFPGASDKTLTKMKLFGADCDHEAMTGDEVMRRLELGYYVS    250
                     |::||||||||||||:||||||||||||.|||||||.||::||||||:|.
BL01492___yer    200 KRRRKRIEGHFPGASEKTLTKMKLFGADADHEAMTGKEVLKRLELGYHVG    249

BSNT_01124___    251 LRNSSIRPDVRKILQELHEKGFRYYDHFFYTTDGATPNFYKGGMTNELIR    300
                     ||.||||||:||||:||||:||.:|||.|||||||||||||.||||:||.
BL01492___yer    250 LRQSSIRPDLRKILRELHEEGFHHYDHMFYTTDGATPNFYKEGMTNKLIE    299

BSNT_01124___    301 IALEEGVPAIDAYNMASFNIAKYYQMDDYLGVVGPGRLASLNILEAPLNP    350
                     ||:|||||.|||||||||||||||.|:|.||||.|||.|:||||.:|..|
BL01492___yer    300 IAIEEGVPLIDAYNMASFNIAKYYHMEDILGVVAPGRYATLNILNSPDEP    349

BSNT_01124___    351 NPVTVLSKGTILREDGCDLKAFTKTDWHKGGLVSLELSYDMTMDDLQFSM    400
                     ||.|||:||.:::..|.::.||:..||.|||||.|.||||:|||||||||
BL01492___yer    350 NPETVLAKGRLIKSGGINMNAFSVPDWQKGGLVPLNLSYDLTMDDLQFSM    399

BSNT_01124___    401 PMGVKMRNAVIMEPYMIEIDNSMEQLSFDHDESYLTMLDRHGKWRVNTMI    450
                     |:|:||||:||||||.||||||:.|||||||||||::.|::||||||||:
BL01492___yer    400 PLGLKMRNSVIMEPYTIEIDNSVNQLSFDHDESYLSLFDKYGKWRVNTML    449

BSNT_01124___    451 KGFASSVQGFVSSFTTTGDIVAIGKNKADMLLAFARMKEIGGGIVLAENR    500
                     ||||:.:||||||::|||||:||||||.||||||.||||||||||||||.
BL01492___yer    450 KGFATRIQGFVSSYSTTGDIIAIGKNKEDMLLAFKRMKEIGGGIVLAENG    499

BSNT_01124___    501 NILHEIPLALCGCASSEAYEDVLEKEQKLRDLLTERGYEFCDPIYTLLFL    550
                     .|||||||.|.|.||.|.||.|||:|:.|::||.||||.|.|||||||||
BL01492___yer    500 KILHEIPLHLSGGASIETYEKVLEREKALKELLFERGYTFDDPIYTLLFL    549

BSNT_01124___    551 QSTHLPYIRITPRGIFDVMKKTVLFPSIMR    580
                     |||||||||:||:|||||||||||||||||
BL01492___yer    550 QSTHLPYIRVTPKGIFDVMKKTVLFPSIMR    579


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