Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03000 and BL01470

See DNA alignment / Visit BSNT_03000 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_03000___ynfE.1.5803.seq
#    -bsequence pep-align/BL01470___ynfE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03000___ynfE-BL01470___ynfE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03000___ynfE-BL01470___ynfE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03000___ynfE
# 2: BL01470___ynfE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      56/87 (64.4%)
# Similarity:    71/87 (81.6%)
# Gaps:           2/87 ( 2.3%)
# Score: 299.0
# 
#
#=======================================

BSNT_03000___      1 MDEILKQYMVLYKKMSNMINGPDYPGKEKDIQHQKDQIEVYEKQLQQGFS     50
                     |:|.|:|||:|.|:..:.||||||.|||:||:.:|:|||:|.|.||||||
BL01470___ynf      1 MNETLQQYMMLVKEHYDTINGPDYTGKEEDIEKRKEQIELYAKTLQQGFS     50

BSNT_03000___     51 TDYDYDVFADSVIKCAYGDMTLEDLEAVYYGLTTPFF     87
                     ||.|||.|||:||||||||:|:|:||.||..||:|  
BL01470___ynf     51 TDDDYDEFADAVIKCAYGDLTVEELETVYRELTSP--     85


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