Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02200 and BL01469

See DNA alignment / Visit BSNT_02200 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_02200___ykkB.1.5803.seq
#    -bsequence pep-align/BL01469___ykkB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02200___ykkB-BL01469___ykkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02200___ykkB-BL01469___ykkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02200___ykkB
# 2: BL01469___ykkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:      80/173 (46.2%)
# Similarity:   103/173 (59.5%)
# Gaps:           6/173 ( 3.5%)
# Score: 380.5
# 
#
#=======================================

BSNT_02200___      1 MNAKTKLV-TDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTR     49
                       .|..:: |||:.||.|. ||.|.....:|:||..|.||...|:::||.
BL01469___ykk      1 --MKDMIMKTDRLILRKMR-RDDAENLLEIFSDPIAMEYYPSTKNEKQTL     47

BSNT_02200___     50 EWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQCGTVPQQIENQTVMEIGYM     99
                     :|::....|.:.:|..||:||.|:|||||||||.|||::|....|||||:
BL01469___ykk     48 QWIDRTLENYEKHGTGLWVAEHKQTGEFLGQCGIVPQEVEGSNEMEIGYL     97

BSNT_02200___    100 FARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIG    149
                     |.|..|.||||.|||.||..|||......|:.:|.|..|..|.:|||:||
BL01469___ykk     98 FKRSVWKNGYATEAASACKQYGFESFHLKKIVSLPDAQNLPSRKVAERIG    147

BSNT_02200___    150 MHHSETTRKWNKPIAVYERKSYN    172
                     |...:|..||.|.||||  ..|.
BL01469___ykk    148 MTLEKTIHKWGKEIAVY--SVYR    168


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