Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03151 and BL01466
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence pep-align/BSNT_03151___yocS.1.5803.seq
# -bsequence pep-align/BL01466___yocS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03151___yocS-BL01466___yocS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03151___yocS-BL01466___yocS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03151___yocS
# 2: BL01466___yocS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity: 245/326 (75.2%)
# Similarity: 279/326 (85.6%)
# Gaps: 5/326 ( 1.5%)
# Score: 1268.0
#
#
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BSNT_03151___ 1 MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIFLGIIMFG 50
|..:.|||.|||:||.||||:||:|||:|||.||||..||||.||:||||
BL01466___yoc 1 MSYLIKISQFAGKTFAIWVILFAILGFAFPSQFTWIVPYITILLGVIMFG 50
BSNT_03151___ 51 MGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAV 100
|||||.|||||||:|:|..|:|||:.|||:|||:|||||:||.||.||||
BL01466___yoc 51 MGLTLSADDFKELLRRPLHVLIGVLIQYTVMPLLAFGLAYGLALPPEIAV 100
BSNT_03151___ 101 GVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLF 150
||||||||||||||||||||||||.|||||:||:||||||.:||.||:.|
BL01466___yoc 101 GVILVGCCPGGTASNVMTFLAKGNIALSVAITTLSTLLAPFLTPFLILFF 150
BSNT_03151___ 151 AKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSV 200
|||||||||||||:|||||||.||||||||:.||:|||.|||..||||||
BL01466___yoc 151 AKEWLPVSPGSLFVSILQAVLLPIIAGLIVQFFFKKQVKKAVQVLPLVSV 200
BSNT_03151___ 201 IGIVAIVSAVVSGNRENLLQSGLLIFSVVILHNGIGYLLGFLCAKLLKMD 250
:||||||||||.|||||::|||||||:||:||||:|..|||:.||..|||
BL01466___yoc 201 LGIVAIVSAVVGGNRENIIQSGLLIFAVVVLHNGLGLFLGFVLAKCFKMD 250
BSNT_03151___ 251 YPSQKAIAIEVGMQNSGLGAALATAHFSPLSAVPSAIFSVWHNLSGSMLA 300
|.||||::||||||||||||||||||||||||||||:||||||||||.||
BL01466___yoc 251 YASQKAVSIEVGMQNSGLGAALATAHFSPLSAVPSAVFSVWHNLSGSWLA 300
BSNT_03151___ 301 TYWSKKVKKIQAGSESSNLSL----- 321
|||:||..|.:..:.|....:
BL01466___yoc 301 TYWAKKTNKQKNDNHSPAPQMINKKL 326
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