Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03151 and BL01466

See Amino acid alignment / Visit BSNT_03151 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence dna-align/BSNT_03151___yocS.1.5803.seq
#    -bsequence dna-align/BL01466___yocS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03151___yocS-BL01466___yocS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03151___yocS-BL01466___yocS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03151___yocS
# 2: BL01466___yocS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity:     710/1003 (70.8%)
# Similarity:   710/1003 (70.8%)
# Gaps:          59/1003 ( 5.9%)
# Score: 2375.5
# 
#
#=======================================

BSNT_03151___      1 ATGGACA-TCATTAGA--AAAATAAGTCATTTTGCAGGACAAACCTTTGG     47
                     |||   | |.|||.||  |||||.|||||.|||||||||.||||.||.|.
BL01466___yoc      1 ATG---AGTTATTTGATCAAAATCAGTCAATTTGCAGGAAAAACGTTCGC     47

BSNT_03151___     48 CATATGGGTCATTGTTTTTGCAGTGCTGGGATTTTCTTTCCCATCTTTAT     97
                     |||.|||||.|||.|.|||||..|.||.||.|||.|.||.||.||....|
BL01466___yoc     48 CATTTGGGTGATTCTATTTGCGATTCTCGGCTTTGCCTTTCCGTCGCAGT     97

BSNT_03151___     98 TTACGTGGATCAGT-TCTTATATTACGATTTTTCTTGGCATTATCATGTT    146
                     |.||.|||||| || .||||||||||||||.|.||||||.|.||.|||||
BL01466___yoc     98 TCACTTGGATC-GTCCCTTATATTACGATTCTGCTTGGCGTGATTATGTT    146

BSNT_03151___    147 TGGGATGGGCCTTACACTGCAAGCCGATGATTTCAAAGAGCTGGTCAGAA    196
                     |||.|||||..|.|||.||..|||.||.|||||.|||||||||.|.|||.
BL01466___yoc    147 TGGCATGGGATTGACATTGTCAGCGGACGATTTTAAAGAGCTGCTGAGAC    196

BSNT_03151___    197 AGCCTTGGCAAGTTATTATTGGAGTAATAGC----TCAGTATACGATCAT    242
                     ..||...|||.||..|.||.||.||    ||    |||.||||||.|.||
BL01466___yoc    197 GTCCCCTGCATGTGCTGATCGGTGT----GCTGATTCAATATACGGTGAT    242

BSNT_03151___    243 GCCGCTCGTTGCTTTCGGCCTCGCATTTGGGCTTCATCTTCCAGCTGAAA    292
                     ||||.|..|.|||||.||.||.||.|.|||.||...|||.||..|.||||
BL01466___yoc    243 GCCGTTGCTCGCTTTTGGACTGGCCTATGGACTCGCTCTCCCCCCCGAAA    292

BSNT_03151___    293 TCGCAGTTGGTGTTATTCTTGTCGGCTGCTGTCCCGGGGGAACTGCATCT    342
                     |.|||||.||.|||||..|.||.||.|||||.|||||||||||.|||||.
BL01466___yoc    293 TAGCAGTGGGGGTTATATTAGTGGGATGCTGCCCCGGGGGAACAGCATCA    342

BSNT_03151___    343 AATGTTATGACATTCTTAGCAAAAGGAAATACTGCCCTTTCTGTTGCGGT    392
                     ||.||.||||||||..|.|||||.||.||||..|||||.|||||.|||.|
BL01466___yoc    343 AACGTCATGACATTTCTGGCAAAGGGGAATATCGCCCTGTCTGTGGCGAT    392

BSNT_03151___    393 TACGACAATTTCTAC-CTTATTGGCACCTGTTGTAACACCGTTGTTGATT    441
                     .||.||..||||.|| ||..|| ||.|||.||.||||.|||||..|.|||
BL01466___yoc    393 CACAACGCTTTCCACACTGCTT-GCCCCTTTTTTAACGCCGTTTCTCATT    441

BSNT_03151___    442 ATGCTGTTTGCCAAAGAATGGCTTCCTGTCTCGCCGGGGTCTTTGTTTAT    491
                     .|..|.||.||.||.|||||||||||.||.||.|||||.|||.||||..|
BL01466___yoc    442 TTATTTTTCGCGAAGGAATGGCTTCCGGTATCTCCGGGCTCTCTGTTCGT    491

BSNT_03151___    492 CTCAATCTTACAGGCGGTTTTATTTCCGATCATTGCAGGTCTGATTG-TC    540
                     .||.||.|||||||||||..|..|.|||||.||.||.||.|||||.| ||
BL01466___yoc    492 GTCGATTTTACAGGCGGTGCTGCTCCCGATTATCGCCGGGCTGATCGTTC    541

BSNT_03151___    541 AAAATGTTTTTC---AGAAAACAAGTGGCAAAAGCCGTACATGCCCTTCC    587
                     ||    ||||||   |.||||||||||..||||||.|||||.|..||.||
BL01466___yoc    542 AA----TTTTTCTTTAAAAAACAAGTGAAAAAAGCTGTACAGGTGCTCCC    587

BSNT_03151___    588 GCTTGTTTCTGTCATTGGCATCGTTGCGATTGTCTCAGCTGTCGTCAGCG    637
                     ||||||.||.||..|.||||||||.||.||.|||||.||.||||||.|.|
BL01466___yoc    588 GCTTGTCTCCGTTCTCGGCATCGTCGCCATCGTCTCCGCAGTCGTCGGAG    637

BSNT_03151___    638 GCAATCGGGAAAATCTGCTTCAATCGGGGTTGCTCATTTTTTCAGTTGTT    687
                     |||||||||||||..|..|||||||.|||.||||.||||||.|.||.|||
BL01466___yoc    638 GCAATCGGGAAAACATTATTCAATCAGGGCTGCTGATTTTTGCGGTAGTT    687

BSNT_03151___    688 ATCCTGCATAATGGTATCGGTTATTTACTTGGGTTTCTTTGTGCAAA--G    735
                     .|.||.||||||||..||||...|||.||.||.|||.|||..|||||  |
BL01466___yoc    688 GTTCTTCATAATGGCCTCGGACTTTTCCTCGGCTTTGTTTTGGCAAAGTG    737

BSNT_03151___    736 CTTTTAAAAATGGATTACCCGTCTCAAAAAGCGATTGCAATCGAAGTCGG    785
                     ||||  |||||||||||..||||.||||||||..|..|.||.||.|||||
BL01466___yoc    738 CTTT--AAAATGGATTATGCGTCGCAAAAAGCCGTGTCCATTGAGGTCGG    785

BSNT_03151___    786 CATGCAAAACTCCGGGCTTGGGGCTGCACTTGCCACGGCTCATTTCTCAC    835
                     ||||||.||.||.||.||.||.||.|||.|.||.|||||.||.|||||.|
BL01466___yoc    786 CATGCAGAATTCGGGTCTCGGCGCGGCATTGGCGACGGCGCACTTCTCCC    835

BSNT_03151___    836 CGCTATCTGCCGTACCAAGCGCAATATTCAGTGTGTGGCATAACCTTTCA    885
                     ||||.||.||.||.||.|||||..|.|||||.||.||||||||.||||||
BL01466___yoc    836 CGCTTTCAGCTGTTCCGAGCGCTGTGTTCAGCGTCTGGCATAATCTTTCA    885

BSNT_03151___    886 GGTTCTAT-GCTTGCAACATATTGGTCCAAAAAAGTGAAAAAGATACAAG    934
                     ||||| || ||||||.|||||.|||.||||||||   |.|||.|.|| ||
BL01466___yoc    886 GGTTC-ATGGCTTGCGACATACTGGGCCAAAAAA---ACAAATAAAC-AG    930

BSNT_03151___    935 CTGGATCCGA-AAGCA------------GCAATCTATCA--------CTT    963
                     ..|.||  || ||.||            ||||...||.|        |||
BL01466___yoc    931 AAGAAT--GACAATCATTCTCCTGCCCCGCAAATGATAAATAAAAAGCTT    978

BSNT_03151___    964 TAA    966
                     |.|
BL01466___yoc    979 TGA    981


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