Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03172 and BL01444

See DNA alignment / Visit BSNT_03172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence pep-align/BSNT_03172___yojE.1.5803.seq
#    -bsequence pep-align/BL01444___yojE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03172___yojE-BL01444___yojE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03172___yojE-BL01444___yojE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03172___yojE
# 2: BL01444___yojE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     214/310 (69.0%)
# Similarity:   250/310 (80.6%)
# Gaps:          12/310 ( 3.9%)
# Score: 1098.5
# 
#
#=======================================

BSNT_03172___      1 MQYSETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFM     50
                     |.:|...||:||||:|:::|||.|||||:|:|..||||||||||||||||
BL01444___yoj      1 MNHSSQTKGIIYTALSYLLWGLLPLYWKVLDQTAALDILAHRIIWSFVFM     50

BSNT_03172___     51 CIVLFFLRQWKIGWQELRSLKKN-GGILSLFLASILISINWFVYIWAVNH     99
                     |.||..|||||.|.:..|||..| ...:.|.|:|:||||||:||||||::
BL01444___yoj     51 CGVLLVLRQWKNGVKAFRSLSGNRKEFVPLILSSVLISINWYVYIWAVSN    100

BSNT_03172___    100 GFLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQ    149
                     |::||||||||||||||::|||:||||||.|:|..||.:||.||:|||||
BL01444___yoj    101 GYILEASLGYYINPLVSIVLGIVFLKEKLTRMQGAAVLLAALGVLISAFQ    150

BSNT_03172___    150 YGSIPYVALLLAFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLF    199
                     |||:||:||:||||||||||:||||||.|||||||||.||.|:|..||||
BL01444___yoj    151 YGSVPYIALMLAFSFGLYGLAKKRTSLSSAIGLTLETMMIAPVAAIYLLF    200

BSNT_03172___    200 SGHVQPAGAESG--GTWLLLFLAGVFTALPLLLFAEGAKRLPLYQVGILQ    247
                     ..|.:.|.|.||  |..:|||||||.||:||||||||||:||||||||||
BL01444___yoj    201 FSHPEKAQAASGSIGMMVLLFLAGVLTAIPLLLFAEGAKKLPLYQVGILQ    250

BSNT_03172___    248 YIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALILFTFSQVKWKRASKS    297
                     ||||||||.:|:|||||||:|||.||||||||||||||.||.:|||..|.
BL01444___yoj    251 YIAPTITLCLGVFVYHEPFNSSKVFTFSCIWAALILFTLSQFQWKRPEKV    300

BSNT_03172___    298 H---------    298
                     .         
BL01444___yoj    301 FLKRKKSFHP    310


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