Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03185 and BL01440
See
DNA alignment /
Visit
BSNT_03185 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence pep-align/BSNT_03185___yodD.1.5803.seq
# -bsequence pep-align/BL01440___yolF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03185___yodD-BL01440___yolF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03185___yodD-BL01440___yolF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: BL01440___yolF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 135/201 (67.2%)
# Similarity: 160/201 (79.6%)
# Gaps: 1/201 ( 0.5%)
# Score: 717.0
#
#
#=======================================
BSNT_03185___ 1 MKHIYEKGTSDNVLLLLHGTGGNEHDLLSLGRFIDPNAHLLGVRGSVLEN 50
|.:|||||.||..|||||||||||||||.:|:.|||:|:||||||:||||
BL01440___yol 1 MNYIYEKGDSDLTLLLLHGTGGNEHDLLPIGKMIDPDANLLGVRGNVLEN 50
BSNT_03185___ 51 GMPRFFKRLSEGVFDEKDLVVRTRELKDFIDEAAETHQFDRGKVIAVGYS 100
||||||:||.|||||||||:.||.|||.|:||||:...|||.:|:|:|||
BL01440___yol 51 GMPRFFRRLREGVFDEKDLIERTDELKTFLDEAAKELHFDRSRVVAIGYS 100
BSNT_03185___ 101 NGANIAASLLFHYKDVLKGAILHHPMVPIRGIELPDMAGLPVFIGAGKYD 150
||||||.||||.::.|||||||||||||.|..:||||.||||||||||.|
BL01440___yol 101 NGANIAGSLLFRHEHVLKGAILHHPMVPFRNRKLPDMTGLPVFIGAGKTD 150
BSNT_03185___ 151 PLCTKEESEELYRYLRDSGASASVFWQDGGHQLTQHEAEQAREWYKEAIV 200
|||..:||.||..|..::||...:.|:.||||||..|.|:|:.||::.|.
BL01440___yol 151 PLCPPQESSELAGYFTNAGAKVLLHWEGGGHQLTHGEIEKAKIWYEKHIK 200
BSNT_03185___ 200 - 200
BL01440___yol 201 A 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.