Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03185 and BL01440

See Amino acid alignment / Visit BSNT_03185 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence dna-align/BSNT_03185___yodD.1.5803.seq
#    -bsequence dna-align/BL01440___yolF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03185___yodD-BL01440___yolF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03185___yodD-BL01440___yolF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: BL01440___yolF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity:     437/638 (68.5%)
# Similarity:   437/638 (68.5%)
# Gaps:          67/638 (10.5%)
# Score: 1382.0
# 
#
#=======================================

BSNT_03185___      1 ATGAAGCATATTTATGAAAAA-GGAACATCTGA---CAACGTACTTTTGC     46
                     |||||..||||.||||||||| ||.|| |||||   ||.|   ||.|||.
BL01440___yol      1 ATGAATTATATATATGAAAAAGGGGAC-TCTGATCTCACC---CTGTTGT     46

BSNT_03185___     47 TGTTGCATGGCACGGGCGGTAATGAACACGATCTGCTTTCATTGGGGCGG     96
                     |.||||||||.||.||.||.||.|||||||||||.||..|..|.||...|
BL01440___yol     47 TATTGCATGGAACAGGGGGAAACGAACACGATCTTCTGCCGATCGGCAAG     96

BSNT_03185___     97 TTTATAGACCCTAATGCCCATTTGCTTGGTGTCAGAGGATCGGTGCTTGA    146
                     .|.||.||.||..||||..|||||||.||.|||||.|||...|||||.||
BL01440___yol     97 ATGATTGATCCCGATGCAAATTTGCTCGGGGTCAGGGGAAATGTGCTGGA    146

BSNT_03185___    147 AAATGGAATGCCGCGATTTTTCAAACGTCTGAGTGAAGGAGTTTTTGATG    196
                     |||.||||||||.||.|||||||..||.|||||.|||||.||.|||||.|
BL01440___yol    147 AAACGGAATGCCCCGTTTTTTCAGGCGGCTGAGAGAAGGGGTGTTTGACG    196

BSNT_03185___    197 AAAAAGATCTTG-TGGTGCGGACAAGA-GAATTGAAAGATTTTATCGACG    244
                     |||||||| ||| |.|..||||| .|| |||||.|||...|||.|.||.|
BL01440___yol    197 AAAAAGAT-TTGATCGAACGGAC-GGATGAATTAAAAACGTTTCTAGATG    244

BSNT_03185___    245 AGGCTGC--AGAAACGCATCAGTTTGATCG----CGGCAAAGTGATTGCA    288
                     |.||.||  ||.||  |.|||.|||||..|    |||    |||.|.|||
BL01440___yol    245 AAGCAGCCAAGGAA--CTTCACTTTGACAGAAGCCGG----GTGGTCGCA    288

BSNT_03185___    289 GTCGGTTATTCAAACGGCGCAAACATTGCGGCAAGCCTGCTTTTTCATTA    338
                     .||||.||||||||||||||.||.||.||||.|||.|||||.||.|.|.|
BL01440___yol    289 ATCGGCTATTCAAACGGCGCCAATATCGCGGGAAGTCTGCTGTTCCGTCA    338

BSNT_03185___    339 TAAAGATGTGTTAAAAGGGGCTATTCTGCATCATCCAATGGTTCCGATTC    388
                     |.||.||||..|.||||||||.|||.||||||||||.|||||||||.|| 
BL01440___yol    339 TGAACATGTACTGAAAGGGGCGATTTTGCATCATCCGATGGTTCCGTTT-    387

BSNT_03185___    389 GGGGTATCG--AGCTGCCTGATATGGCGGGGCTCCCTGTTTTTATCGGTG    436
                      .|..||||  ||||.|||||||||.|.||.||.||.||.||||||||.|
BL01440___yol    388 -AGAAATCGCAAGCTCCCTGATATGACAGGTCTGCCCGTGTTTATCGGGG    436

BSNT_03185___    437 CCGGGAAATAC-GATCCTCTTTGCACGAAGGAAGAATCAGAAGAGCTTTA    485
                     ||||.||| || |||||.||.||..||..|.|.||||||...||||||..
BL01440___yol    437 CCGGCAAA-ACAGATCCGCTCTGTCCGCCGCAGGAATCAAGCGAGCTTGC    485

BSNT_03185___    486 CCGCTATTT-----ACGTGACAGCGGGGCATCAG-CCTCCGTTTTCTGGC    529
                     |.|||||||     |||     .|||.||...|| .|||| ||..||||.
BL01440___yol    486 CGGCTATTTCACAAACG-----CCGGCGCCAAAGTGCTCC-TTCACTGGG    529

BSNT_03185___    530 AGGACGGGGGCCATCAGCTGACTCA--GCATGAAGCTGAACAGGCTCGTG    577
                     |.|.|||.||||||||||||||.||  ||  |||..||||.||||    |
BL01440___yol    530 AAGGCGGAGGCCATCAGCTGACACACGGC--GAAATTGAAAAGGC----G    573

BSNT_03185___    578 AA----TGGTACAAAGAGGCGATTGTATAA--------    603
                     ||    |||||..||.||     ..|||||        
BL01440___yol    574 AAAATCTGGTATGAAAAG-----CATATAAAAGCATAA    606


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