Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03185 and BL01440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03185___yodD.1.5803.seq
# -bsequence dna-align/BL01440___yolF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03185___yodD-BL01440___yolF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03185___yodD-BL01440___yolF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: BL01440___yolF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity: 437/638 (68.5%)
# Similarity: 437/638 (68.5%)
# Gaps: 67/638 (10.5%)
# Score: 1382.0
#
#
#=======================================
BSNT_03185___ 1 ATGAAGCATATTTATGAAAAA-GGAACATCTGA---CAACGTACTTTTGC 46
|||||..||||.||||||||| ||.|| ||||| ||.| ||.|||.
BL01440___yol 1 ATGAATTATATATATGAAAAAGGGGAC-TCTGATCTCACC---CTGTTGT 46
BSNT_03185___ 47 TGTTGCATGGCACGGGCGGTAATGAACACGATCTGCTTTCATTGGGGCGG 96
|.||||||||.||.||.||.||.|||||||||||.||..|..|.||...|
BL01440___yol 47 TATTGCATGGAACAGGGGGAAACGAACACGATCTTCTGCCGATCGGCAAG 96
BSNT_03185___ 97 TTTATAGACCCTAATGCCCATTTGCTTGGTGTCAGAGGATCGGTGCTTGA 146
.|.||.||.||..||||..|||||||.||.|||||.|||...|||||.||
BL01440___yol 97 ATGATTGATCCCGATGCAAATTTGCTCGGGGTCAGGGGAAATGTGCTGGA 146
BSNT_03185___ 147 AAATGGAATGCCGCGATTTTTCAAACGTCTGAGTGAAGGAGTTTTTGATG 196
|||.||||||||.||.|||||||..||.|||||.|||||.||.|||||.|
BL01440___yol 147 AAACGGAATGCCCCGTTTTTTCAGGCGGCTGAGAGAAGGGGTGTTTGACG 196
BSNT_03185___ 197 AAAAAGATCTTG-TGGTGCGGACAAGA-GAATTGAAAGATTTTATCGACG 244
|||||||| ||| |.|..||||| .|| |||||.|||...|||.|.||.|
BL01440___yol 197 AAAAAGAT-TTGATCGAACGGAC-GGATGAATTAAAAACGTTTCTAGATG 244
BSNT_03185___ 245 AGGCTGC--AGAAACGCATCAGTTTGATCG----CGGCAAAGTGATTGCA 288
|.||.|| ||.|| |.|||.|||||..| ||| |||.|.|||
BL01440___yol 245 AAGCAGCCAAGGAA--CTTCACTTTGACAGAAGCCGG----GTGGTCGCA 288
BSNT_03185___ 289 GTCGGTTATTCAAACGGCGCAAACATTGCGGCAAGCCTGCTTTTTCATTA 338
.||||.||||||||||||||.||.||.||||.|||.|||||.||.|.|.|
BL01440___yol 289 ATCGGCTATTCAAACGGCGCCAATATCGCGGGAAGTCTGCTGTTCCGTCA 338
BSNT_03185___ 339 TAAAGATGTGTTAAAAGGGGCTATTCTGCATCATCCAATGGTTCCGATTC 388
|.||.||||..|.||||||||.|||.||||||||||.|||||||||.||
BL01440___yol 339 TGAACATGTACTGAAAGGGGCGATTTTGCATCATCCGATGGTTCCGTTT- 387
BSNT_03185___ 389 GGGGTATCG--AGCTGCCTGATATGGCGGGGCTCCCTGTTTTTATCGGTG 436
.|..|||| ||||.|||||||||.|.||.||.||.||.||||||||.|
BL01440___yol 388 -AGAAATCGCAAGCTCCCTGATATGACAGGTCTGCCCGTGTTTATCGGGG 436
BSNT_03185___ 437 CCGGGAAATAC-GATCCTCTTTGCACGAAGGAAGAATCAGAAGAGCTTTA 485
||||.||| || |||||.||.||..||..|.|.||||||...||||||..
BL01440___yol 437 CCGGCAAA-ACAGATCCGCTCTGTCCGCCGCAGGAATCAAGCGAGCTTGC 485
BSNT_03185___ 486 CCGCTATTT-----ACGTGACAGCGGGGCATCAG-CCTCCGTTTTCTGGC 529
|.||||||| ||| .|||.||...|| .|||| ||..||||.
BL01440___yol 486 CGGCTATTTCACAAACG-----CCGGCGCCAAAGTGCTCC-TTCACTGGG 529
BSNT_03185___ 530 AGGACGGGGGCCATCAGCTGACTCA--GCATGAAGCTGAACAGGCTCGTG 577
|.|.|||.||||||||||||||.|| || |||..||||.|||| |
BL01440___yol 530 AAGGCGGAGGCCATCAGCTGACACACGGC--GAAATTGAAAAGGC----G 573
BSNT_03185___ 578 AA----TGGTACAAAGAGGCGATTGTATAA-------- 603
|| |||||..||.|| ..|||||
BL01440___yol 574 AAAATCTGGTATGAAAAG-----CATATAAAAGCATAA 606
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