Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03200 and BL01437
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence pep-align/BSNT_03200___deoD.1.5803.seq
# -bsequence pep-align/BL01437___deoD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03200___deoD-BL01437___deoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03200___deoD-BL01437___deoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: BL01437___deoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 202/233 (86.7%)
# Similarity: 220/233 (94.4%)
# Gaps: 1/233 ( 0.4%)
# Score: 1038.0
#
#
#=======================================
BSNT_03200___ 1 MSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTG 50
|||||||||||||:||||||||||||:||:||||||||||||||||||||
BL01437___deo 1 MSVHIGAEKGQIAETVLLPGDPLRAKYIADTYLENVECYNEVRGMYGFTG 50
BSNT_03200___ 51 TYKGKKISVQGTGMGVPSISIYVNELIQSFDVQNLIRVGSCGAIRKDVKV 100
|||||::||||||||||||||||||||:|:||:|||||||||||||||.|
BL01437___deo 51 TYKGKRVSVQGTGMGVPSISIYVNELIRSYDVKNLIRVGSCGAIRKDVNV 100
BSNT_03200___ 101 RDVILAMTSSTDSQMNRVAFGSIDFAPCADFELLKNAYDAAKDKGVPVTV 150
||||||||||||||:||||||||||||||||.|||.|||||.::.:|||.
BL01437___deo 101 RDVILAMTSSTDSQINRVAFGSIDFAPCADFGLLKAAYDAASERNIPVTA 150
BSNT_03200___ 151 GSVFTADQFYNDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILT 200
|:|||||||||||||||||||:|||.||||||||||||||.|||||||||
BL01437___deo 151 GNVFTADQFYNDDSQIEKLAKHGVLAVEMETTALYTLAAKFGRKALSILT 200
BSNT_03200___ 201 VSDHVLTGEETTAEERQTTFHDMIEVALHSVSQ 233
|||||:||||||||||||||:|||.:||.:..
BL01437___deo 201 VSDHVITGEETTAEERQTTFNDMILLALDTAL- 232
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