Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03200 and BL01437
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_03200___deoD.1.5803.seq
# -bsequence dna-align/BL01437___deoD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03200___deoD-BL01437___deoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03200___deoD-BL01437___deoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: BL01437___deoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 721
# Identity: 518/721 (71.8%)
# Similarity: 518/721 (71.8%)
# Gaps: 41/721 ( 5.7%)
# Score: 1839.0
#
#
#=======================================
BSNT_03200___ 1 ATGAGTGTACATATAGGTGCTGAAAAAGGACAAATTGCGGATACAGTGCT 50
|||||.||||||||.||.||.|||||||||||||||||.||.||.|||||
BL01437___deo 1 ATGAGCGTACATATTGGCGCAGAAAAAGGACAAATTGCAGAAACGGTGCT 50
BSNT_03200___ 51 TTTGCCGGGAGATCCTCTCAGAGCAAAATTTATTGCAGAAACGTATCTTG 100
..|.||.|||||.||.||..|.|||||||.|||.||.||.||.|||.|.|
BL01437___deo 51 GCTTCCAGGAGACCCGCTGCGCGCAAAATATATCGCTGATACATATTTGG 100
BSNT_03200___ 101 AAAATGTAGAATGCTACAATGAAGTCAGAGGCATGTATGGATTTACGGGT 150
||||.||.|||||.||.||.|||||..|.||.|||||.||.|||||.||.
BL01437___deo 101 AAAACGTTGAATGTTATAACGAAGTACGGGGAATGTACGGGTTTACCGGC 150
BSNT_03200___ 151 ACATATAAAGGTAAAAAAA-----TCTCAGTACAAGGCACGGGAATGGGT 195
||.|||||||| ||| |.||.||.||.||.|||||.||||||
BL01437___deo 151 ACTTATAAAGG-----AAAGCGCGTTTCCGTTCAGGGGACGGGCATGGGT 195
BSNT_03200___ 196 GTTCCGTCTATTTCAATTTATGTGAATGAATTAATTCA-AAGCTTCGATG 244
||.||||||||||||||||||||.||||||.|.| ||| |||||..||||
BL01437___deo 196 GTGCCGTCTATTTCAATTTATGTCAATGAACTGA-TCAGAAGCTATGATG 244
BSNT_03200___ 245 TGCAAAATCTAATAAGAGTCGGTTCTTGCGGCGCTATTCGTAAAGATGTC 294
||.||||.||.||..|.|||||.||.|||||.||.||..|.|||||.|||
BL01437___deo 245 TGAAAAACCTGATCCGCGTCGGATCGTGCGGTGCGATCAGAAAAGACGTC 294
BSNT_03200___ 295 AAAGTGCGAGACGTCATTTTGGCGATGACCTCCTCAACTGATTCACAAAT 344
||.||..||||.||||||.|.||||||||.||.|||||||||||||||||
BL01437___deo 295 AATGTAAGAGATGTCATTCTTGCGATGACTTCATCAACTGATTCACAAAT 344
BSNT_03200___ 345 GAACAGAGTCGCTTTTGGAAGCATTGATTTTGCGCCTTGCGCAGATTTCG 394
.||||||||.||.||.||....||.||.||||||||.|||||.||.||||
BL01437___deo 345 CAACAGAGTGGCATTCGGCTCGATCGACTTTGCGCCCTGCGCGGACTTCG 394
BSNT_03200___ 395 AGCTTTTAAAAAATGCCTATGATGCCGCAAAGGATAAAGGTG-------- 436
..||..|||||..|||.|||||.||.|||| |||
BL01437___deo 395 GCCTGCTAAAAGCTGCTTATGACGCTGCAA---------GTGAGCGGAAC 435
BSNT_03200___ 437 -TGCCGGTGACTGTAGGAAGCGTATTTACAGCTGACCAGTTCTACAACGA 485
|.|||||.||.|.|||.|..||.|||||.||.||.||.|||||.|||||
BL01437___deo 436 ATCCCGGTTACGGCAGGGAATGTGTTTACGGCGGATCAATTCTATAACGA 485
BSNT_03200___ 486 CGATTCGCAAATTGAAAAACTTGCAAAATACGGTGTGCTTGGCGTTGAAA 535
|||....||||||||.||.|||||.|||.||||.|||||||..||.||.|
BL01437___deo 486 CGACAGCCAAATTGAGAAGCTTGCCAAACACGGAGTGCTTGCGGTCGAGA 535
BSNT_03200___ 536 TGGAAACAACTGCATTGTATACATTAGCAGCGAAGCACGGAAGAAAAGCC 585
|||||||.||.||..|.||||||||.||.|||||...|||..||||||||
BL01437___deo 536 TGGAAACGACGGCGCTTTATACATTGGCTGCGAAATTCGGCCGAAAAGCC 585
BSNT_03200___ 586 CTGTCAATTCTCACCGTGAGTGATCACGT-ATTAACAGGAGAAGAAACGA 634
||.||.|||.|.||.||.||.|||||||| ||| ||.||.||.|||||.|
BL01437___deo 586 CTCTCCATTTTAACGGTCAGCGATCACGTCATT-ACCGGCGAGGAAACAA 634
BSNT_03200___ 635 CAGCGGAAGAGCGTCAAACGACATTTCATGATATGATAGAAGTGGCTTTA 684
|.||.|||||..|.||.|||||.|||.||||||||||.....|||||.|.
BL01437___deo 635 CGGCAGAAGAAAGACAGACGACCTTTAATGATATGATTCTGCTGGCTCTG 684
BSNT_03200___ 685 CATTCCG---TATCACAATAA 702
.||.|.| |.|.|
BL01437___deo 685 GATACTGCTTTGTAA------ 699
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