Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03217 and BL01429

See DNA alignment / Visit BSNT_03217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_03217___yodP.1.5803.seq
#    -bsequence pep-align/BL01429___yodP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03217___yodP-BL01429___yodP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03217___yodP-BL01429___yodP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03217___yodP
# 2: BL01429___yodP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     128/278 (46.0%)
# Similarity:   176/278 (63.3%)
# Gaps:           4/278 ( 1.4%)
# Score: 654.0
# 
#
#=======================================

BSNT_03217___      1 MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKVLPDIVAAAKEENAEK     50
                     |:|...:...|...|.|.|:||||:|.|:|.:....|||:..||:.:..|
BL01429___yod      1 MVKKWSNDSCTLEADVDLFSKRIRIVNYEGNVCSFFPDILKEAKKHDIGK     50

BSNT_03217___     51 IIVYAKQHDEPMLAKQLFAPEGYLKGYYLGHSACVMVRYLSESRRQTDSY    100
                     ||::.|..|...|.::.|.|||.:.||:.||.|.|.|:|:.|.||:|..:
BL01429___yod     51 IIIFTKTTDRDALLERTFEPEGKIDGYFNGHDADVFVKYVKEDRRKTADW    100

BSNT_03217___    101 TEEQEIIEAIYRTAPRLRNDSKPVFTMRKAETNDMYQLSMLYKKVFRTYP    150
                     ..:.:::..::.| ||:.......|.:|:|.:.|...|:.||..||..||
BL01429___yod    101 LMQDQMLAELFST-PRIAEIQNASFKIRRAVSVDAPVLADLYNSVFPVYP    149

BSNT_03217___    151 TPVFDPAYIEKTMNANTVYYIMFDHDRLISAASAEINPELGHAEITDCAV    200
                     .||.|.||:::.|....|||:.||.:::|::|.|::||.||:||||||||
BL01429___yod    150 APVSDSAYLKEAMGKGAVYYLAFDGEKVIASAGADVNPALGNAEITDCAV    199

BSNT_03217___    201 LPEYRGHSLTSFLIEALEKEMAGKDIFHVFSLARASSFGMNAVLYHSGYQ    250
                     ||||||.|||..||..||.::....||.|||:|||:||||||.|||..|.
BL01429___yod    200 LPEYRGFSLTRRLIAELETDLKQSGIFCVFSIARAASFGMNASLYHLSYS    249

BSNT_03217___    251 YGGRLINNCFIAEGLENMNIWCKQL---    275
                     |.|||:|||.|...:||||||||.|   
BL01429___yod    250 YRGRLLNNCLIYRSIENMNIWCKNLSRS    277


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